source: trunk/src/browse_data.m @ 1064

Last change on this file since 1064 was 1064, checked in by sommeria, 5 years ago

calibration repaired

File size: 26.4 KB
RevLine 
[569]1%'browse_data': function for scanning directories in a campaign
2%------------------------------------------------------------------------
3% function varargout = series(varargin)
4% associated with the GUI browse_data.fig
5
[809]6%=======================================================================
[1061]7% Copyright 2008-2019, LEGI UMR 5519 / CNRS UGA G-INP, Grenoble, France
[809]8%   http://www.legi.grenoble-inp.fr
9%   Joel.Sommeria - Joel.Sommeria (A) legi.cnrs.fr
10%
[569]11%     This file is part of the toolbox UVMAT.
[809]12%
[569]13%     UVMAT is free software; you can redistribute it and/or modify
[809]14%     it under the terms of the GNU General Public License as published
15%     by the Free Software Foundation; either version 2 of the license,
16%     or (at your option) any later version.
17%
[569]18%     UVMAT is distributed in the hope that it will be useful,
19%     but WITHOUT ANY WARRANTY; without even the implied warranty of
20%     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
[809]21%     GNU General Public License (see LICENSE.txt) for more details.
22%=======================================================================
[569]23
24function varargout = browse_data(varargin)
25
[1063]26% Last Modified by GUIDE v2.5 17-Apr-2019 18:15:24
[569]27
28% Begin initialization code - DO NOT EDIT
29gui_Singleton = 1;
30gui_State = struct('gui_Name',       mfilename, ...
31                   'gui_Singleton',  gui_Singleton, ...
32                   'gui_OpeningFcn', @browse_data_OpeningFcn, ...
33                   'gui_OutputFcn',  @browse_data_OutputFcn, ...
34                   'gui_LayoutFcn',  [] , ...
35                   'gui_Callback',   []);
36if nargin && ischar(varargin{1}) && ~isempty(regexp(varargin{1},'_Callback','once'))             
37    gui_State.gui_Callback = str2func(varargin{1});
38end
39
40if nargout
41    [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
42else
43    gui_mainfcn(gui_State, varargin{:});
44end
45% End initialization code - DO NOT EDIT
46
47%------------------------------------------------------------------------
48% --- Executes just before browse_data is made visible.
[1059]49function browse_data_OpeningFcn(hObject, eventdata, handles, InputDir,EnableMirror,MultiDevices)
[569]50%------------------------------------------------------------------------
[581]51
52%% Choose default command line output for browse_data
[1059]53handles.output =hObject;% 'Cancel';
[569]54
[581]55%% Update handles structure
[569]56guidata(hObject, handles);
[581]57set(hObject,'WindowButtonDownFcn',{'mouse_down'}) % allows mouse action with right button (zoom for uicontrol display)
[1059]58set(hObject,'DeleteFcn',{@closefcn})%
[569]59
[581]60%% Determine the position of the dialog - centered on the screen
[569]61FigPos=get(0,'DefaultFigurePosition');
62OldUnits = get(hObject, 'Units');
63set(hObject, 'Units', 'pixels');
64OldPos = get(hObject,'Position');
65FigWidth = OldPos(3);
66FigHeight = OldPos(4);
67ScreenUnits=get(0,'Units');
68set(0,'Units','pixels');
69ScreenSize=get(0,'ScreenSize');
70set(0,'Units',ScreenUnits);
71FigPos(1)=1/2*(ScreenSize(3)-FigWidth);
72FigPos(2)=2/3*(ScreenSize(4)-FigHeight);
73FigPos(3:4)=[FigWidth FigHeight];
74set(hObject, 'Position', FigPos);
75set(hObject, 'Units', OldUnits);
[931]76if exist('MultiDevices','var') && strcmp(MultiDevices,'on')
[1063]77    set(handles.DataSeries,'Max',2)
[931]78else
[1063]79    set(handles.DataSeries,'Max',1)
[931]80end
[837]81if exist('EnableMirror','var') && strcmp(EnableMirror,'on')
82    set(handles.CreateMirror,'Visible','on')
83    set(handles.mirror_txt,'Visible','on')
84else
85    set(handles.CreateMirror,'Visible','off')
86    set(handles.mirror_txt,'Visible','off')
87end
[856]88
89%% initialize the GUI
[1059]90if isempty(regexp(InputDir,'^http:'))&& ~(exist('InputDir','var') && ischar(InputDir) && exist(InputDir,'dir'))
91    InputDir=pwd;% current dir is the starting data series by default
[856]92end
[1059]93% [Experiment,DataSeries,Ext]=fileparts(DataSeries);
94% DataSeries=[DataSeries Ext];
95% [Campaign,Experiment,Ext]=fileparts(Experiment);
96% Experiment=[Experiment Ext];
97[ExpWithPath,DataSeries]=fileparts(InputDir);
98[Campaign,Experiment,Ext]=fileparts(ExpWithPath);
[856]99[tild,CampaignName]=fileparts(Campaign);
100RootXml=fullfile(Campaign,[CampaignName '.xml']);
101s=[];
102if exist(RootXml,'file')
103    [s,Heading]=xml2struct(RootXml);%read the xml file
104    if isfield(s,'SourceDir')
105        set(handles.SourceDir,'String',s.SourceDir);%display the source dir if a mirror has been opened
106        set(handles.MirrorDir,'Visible','on');%  mirror dir display
107        set(handles.MirrorDir,'String',Campaign);%display the opened mirror dir
108        set(handles.CreateMirror,'String','update_mirror')
[569]109    end
110end
[856]111if isempty(s) %a source dir has been opened
112    set(handles.SourceDir,'String',Campaign);
113    set(handles.MirrorDir,'Visible','off');% no mirror dir display
114    set(handles.CreateMirror,'String','create_mirror')
115end
[1059]116errormsg=scan_campaign(handles,Campaign,Experiment,ExpWithPath);
[856]117if ~isempty(errormsg)
118    msgbox_uvmat('ERROR',errormsg)
119    return
120end
[1059]121% set(handles.OK,'Visible','on')
122% set(handles.Cancel,'Visible','on')
[569]123
[1059]124%set(handles.browse_data,'WindowStyle','modal')% Make the GUI
125%modal%%%%%%%%%%%%%%%%%%%%%%%
[856]126set(hObject,'Visible','on')
127drawnow
[1059]128% UIWAIT makes GUI wait for user response (see UIRESUME)%%%%%%%%%%%%%%%%TO
129% CHECK
130%uiwait(handles.browse_data);
[837]131
[856]132
133
[569]134%------------------------------------------------------------------------
135% --- Outputs from this function are returned to the command line.
136function varargout = browse_data_OutputFcn(hObject, eventdata, handles)
137%------------------------------------------------------------------------
138% Get default command line output from handles structure
139varargout{1} = handles.output;
[1059]140%%%%%%%%%%%%%%%%%%delete(handles.browse_data)
[569]141
142%------------------------------------------------------------------------
143% --- Executes on button press in CreateMirror.
144function CreateMirror_Callback(hObject, eventdata, handles)
145%------------------------------------------------------------------------
[733]146set(handles.SourceDir,'BackgroundColor',[1 1 0])% indicate action of button by yellow color
147drawnow
[571]148SourceDir=get(handles.SourceDir,'String');
149[SourcePath,ProjectName]=fileparts(SourceDir);
150if strcmp(get(handles.MirrorDir,'Visible'),'on')
[733]151    MirrorDir=get(handles.MirrorDir,'String');% name of the mirror folder
152else% create the mirror folder if it does not exist
[651]153    MirrorRoot=uigetfile_uvmat('select the folder which must contain the mirror directory:',SourcePath,'uigetdir');
154    if isempty(MirrorRoot)
[569]155        return
[741]156    elseif strcmp(MirrorRoot,SourcePath)
157        msgbox_uvmat('ERROR','The mirror folder must be different from the source')
158        return
[569]159    else
160        MirrorDir=fullfile(MirrorRoot,ProjectName);
161    end
[741]162    if exist(MirrorDir,'dir')
163        msgbox_uvmat('ERROR',['The folder ' MirrorDir ' chosen as new mirror campaign already exists'])
164        return
165    else
166        [s,errormsg]=mkdir(MirrorDir)% create the mirror dir
167        if s~=1
168            msgbox_uvmat('ERROR',['error in creating ' MirrorDir ': ' errormsg])
169            return
170        end
[569]171    end
172    MirrorDoc.SourceDir=SourceDir;
173    t=struct2xml(MirrorDoc);
174    set(t,1,'name','DataTree');
[741]175    save(t,fullfile(MirrorDir,[ProjectName '.xml']))% create an xml file in the mirror folder to indicate its source folder
[569]176    set(handles.MirrorDir,'String',MirrorDir)
177    set(handles.MirrorDir,'Visible','on')
[741]178    set(handles.CreateMirror,'String','update_mirror')
[569]179end
180ExpName={''};
[733]181
182%% update the mirror from the source dir
[569]183if exist(SourceDir,'dir')
184    hdir=dir(SourceDir); %list files and dirs
185    idir=0;
186    for ilist=1:length(hdir)
[733]187        if hdir(ilist).isdir% scan all subfolders
188            dirname=hdir(ilist).name;%
189            if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0')%skip subfolder beginning by '0'
[569]190                idir=idir+1;
[733]191                mirror=fullfile(MirrorDir,hdir(ilist).name);% corresponding name in the mirror
[569]192                if ~exist(mirror,'dir')
[733]193                   mkdir(mirror)% create the mirror folder if it does not exist
[569]194                end
[733]195                ExpName{idir}=['+/' hdir(ilist).name];% insert '+/' in the list to show that it is a folder
[569]196            end
197            % look for the list of 'devices'
198        else
199            %warning for isolated files
200        end
201    end
202    set(handles.ListExperiments,'String',[{'*'};ExpName'])
203    set(handles.ListExperiments,'Value',1)
[733]204     update_experiments(handles,[{'*'};ExpName'],SourceDir,MirrorDir)
205   % ListExperiments_Callback(hObject, eventdata, handles) % list the content of the experiment
[569]206else
207    msgbox_uvmat('ERROR',['The input ' SourceDir ' is not a directory'])
208end
209set(handles.SourceDir,'BackgroundColor',[1 1 1])
210
211%------------------------------------------------------------------------
[856]212% List the experiments in a campaign, filling the menu ListExperiments
[569]213%------------------------------------------------------------------------
[1063]214function errormsg=scan_campaign(handles,Campaign,Experiment,DataInput)
[856]215%------------------------------------------------------------------------
[733]216errormsg='';
[1037]217if ~isempty(regexp(Campaign,'^http'))|| exist(Campaign,'dir')
218    ListStruct=dir_uvmat(Campaign); %list files and dirs
[733]219    if numel(ListStruct)>1000% A campaign folder must contain maily a list of 'experiment' sub-folders
[1059]220        errormsg=[Campaign ' contains too many items (>1000) to be a Project folder'];
[733]221        return
222    end
[651]223    ListCells=struct2cell(ListStruct);% transform dir struct to a cell arrray
224    ListFiles=ListCells(1,:);%list of dir and file  names
225    check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
226    ListFiles(check_dir)=regexprep(ListFiles(check_dir),'^.+','+/$0');% put '+/' in front of dir name display
227    cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
228    check_keep=cellfun('isempty', cell_remove);
229    ListFiles=sort((ListFiles(check_keep))');
[856]230    index=find(strcmp(['+/' Experiment],ListFiles));
[1059]231    if isempty(index), index=1; end
232    set(handles.ListExperiments,'String',ListFiles)
233    set(handles.ListExperiments,'Value',index)% initialise the menu selection with the folder defined by the input
[570]234    ListExperiments_Callback([],[], handles)
[1063]235    DataSeries=get(handles.DataSeries,'String');
236    index=find(strcmp(['+/' DataInput],DataSeries));
[856]237    if isempty(index)
[1063]238        index=find(strcmp(['~/' DataInput],DataSeries));
[856]239    end
240    if ~isempty(index)
[1063]241          set(handles.DataSeries,'Value',index)
[856]242    end
[569]243else
[570]244    msgbox_uvmat('ERROR',['The input ' Campaign ' is not a directory'])
[569]245end
246
247%------------------------------------------------------------------------
248% --- Executes on selection change in ListExperiments.
[651]249%------------------------------------------------------------------------
[569]250 function ListExperiments_Callback(hObject, eventdata, handles)
[651]251
[571]252if strcmp(get(handles.MirrorDir,'Visible'),'on')
[589]253    MirrorPath=get(handles.MirrorDir,'String');
[741]254else
255    MirrorPath=get(handles.SourceDir,'String');
[571]256end
[569]257ListExperiments=get(handles.ListExperiments,'String');
258list_val=get(handles.ListExperiments,'Value');
[1064]259ListExperiments=ListExperiments(list_val);%choose selected experiments
[733]260list_dataseries(handles,ListExperiments,MirrorPath)
[571]261
[733]262%------------------------------------------------------------------------
263% --- List the DataSeries when a set of experiments is selected
264%------------------------------------------------------------------------
265 function list_dataseries(handles,ListExperiments,MirrorPath)
[571]266
[1063]267DataSeries={};
[733]268for iexp=1:numel(ListExperiments)
269    if strcmp(ListExperiments{iexp}(1),'+')% if the item is a directory
[741]270        ListExperiments{iexp}(1)=[];%remove the first char '+' used to mark folders
[733]271        ListStruct=dir(fullfile(MirrorPath,ListExperiments{iexp})); %list files and dir in the source experiment directory
272        ListCells=struct2cell(ListStruct);%transform dir struct to a cell arrray
273        ListFiles=ListCells(1,:);%list of dir and file  names
274        cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
[934]275        cell_remove_tild=regexp(ListFiles,'~$');% detect tild the end of file nqme (do not list)
276        check_keep=cellfun('isempty', cell_remove) & cellfun('isempty', cell_remove_tild);
[733]277        check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
278        for ilist=1:numel(ListFiles)
279            if check_keep(ilist)% loop on eligible DataSeries folders
280                mirror=fullfile(MirrorPath,ListExperiments{iexp},ListFiles{ilist});%source folder
281                if ~exist(mirror,'file') && ~exist(mirror,'dir')% if the name is a broken link
282                    delete(mirror)% delete broken link
283                else %update the list of dataSeries
284                    [tild,msg]=fileattrib(mirror);
[1059]285%                     msg.Name=regexprep(msg.Name,'^/.','/');%remove the dot in /. at the beginning of the name
286%                     if ~strcmp(msg.Name,mirror)% if it is a link
287%                         ListFiles{ilist}=['~' ListFiles{ilist}];%mark link by '@' in the list
288%                     end
[733]289                    if check_dir(ilist)
290                        ListFiles{ilist}=['+/' ListFiles{ilist}];%mark dir by '+' in the list
291                    end
[1063]292                    if isempty(find(strcmp(ListFiles{ilist},DataSeries), 1))% if the item is not already in DataSeries
293                        DataSeries=[DataSeries;ListFiles{ilist}]; %append the item to the list
[733]294                    end                   
295                end
296            end
297        end
298    end
299end
[1064]300if get(handles.CheckDevices,'Value')
301    set(handles.ListDevices,'Value',1)
302set(handles.ListDevices,'String',sort(DataSeries))
303CheckDevices_Callback([],[], handles)
304else
[1063]305set(handles.DataSeries,'Value',1)
306set(handles.DataSeries,'String',sort(DataSeries))
[1064]307end
[733]308
[571]309%------------------------------------------------------------------------
[733]310% --- Executes when the mirror is created or updated
[651]311%------------------------------------------------------------------------
[733]312 function update_experiments(handles,ListExperiments,CampaignPath,MirrorPath)
[651]313
[1063]314DataSeries={};
[569]315for iexp=1:numel(ListExperiments)
[651]316    if strcmp(ListExperiments{iexp}(1),'+')% if the item is a directory
317        ListExperiments{iexp}(1)=[];
[733]318        ListStruct=dir(fullfile(CampaignPath,ListExperiments{iexp})); %list files and dir in the source experiment directory
319        ListCells=struct2cell(ListStruct);%transform dir struct to a cell arrray
[651]320        ListFiles=ListCells(1,:);%list of dir and file  names
321        cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
322        check_keep=cellfun('isempty', cell_remove);
323        check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
324        for ilist=1:numel(ListFiles)
[733]325            if check_keep(ilist)% loop on eligible DataSeries folders
326                DataSeries=fullfile(CampaignPath,ListExperiments{iexp},ListFiles{ilist});%source folder
[651]327                if ~isempty(MirrorPath)
328                    mirror=fullfile(MirrorPath,ListExperiments{iexp},ListFiles{ilist});
[741]329                    if exist(mirror,'file')% if mirror already exists as a file or folder
[733]330                        [tild,msg]=fileattrib(mirror);
331                        if strcmp(msg.Name,mirror)%if the mirror name already exists as a local file or dir
[741]332                            if msg.directory% case of a folder
[733]333                                answer=msgbox_uvmat('INPUT_Y-N',['replace local folder ' msg.Name ' by a link to the source dir']);
334                                if strcmp(answer,'Yes')
335                                    [ss,msg]=rmdir(mirror);
336                                    if ss==1
337                                        system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder
338                                    else
339                                        msgbox_uvmat('ERROR',['enable to delete local folder: ' msg]);
340                                    end
341                                end
[741]342                            else % case of an existing mirror file
[733]343                                answer=msgbox_uvmat('INPUT_Y-N',['replace local file ' msg.Name ' by a link to the source file']);
344                                if strcmp(answer,'Yes')
345                                    delete(mirror);
[741]346                                    system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder                                 
[733]347                                end
348                            end
349                        end
[741]350                    else% create mirror to the data series if needed
351                        system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder                     
[651]352                    end
[1063]353                    if isempty(find(strcmp(ListFiles{ilist},DataSeries), 1))% if the item is not already in DataSeries
[733]354                        if check_dir(ilist)
355                            ListFiles{ilist}=['+/' ListFiles{ilist}];%mark dir by '+' in the list
356                        end
[1063]357                        DataSeries=[DataSeries;ListFiles{ilist}]; %append the item to the list
[651]358                    end
359                end
[570]360            end
[569]361        end
362    end
363end
[1063]364set(handles.DataSeries,'String',sort(DataSeries))
[569]365
366%------------------------------------------------------------------------
367% --- Executes on button press in CampaignDoc.
368function CampaignDoc_Callback(hObject, eventdata, handles)
369%------------------------------------------------------------------------   
[651]370answer=msgbox_uvmat('INPUT_Y-N','This function will update the global xml rpresentation of the data set and the Heading of each xml file');
[569]371if ~isequal(answer{1},'OK')
372    return
373end
374set(handles.ListExperiments,'Value',1)
375ListExperiments_Callback(hObject, eventdata, handles)%update the overview of the experiment directories
[581]376DataviewData=get(handles.browse_data,'UserData');
[569]377List=DataviewData.List;
378Currentpath=get(handles.SourceDir,'String');
379[Currentpath,Campaign,DirExt]=fileparts(Currentpath);
380Campaign=[Campaign DirExt];
381t=xmltree;
382t=set(t,1,'name','CampaignDoc');
383t = attributes(t,'add',1,'source','directory');
384SubCampaignTest=get(handles.SubCampaignTest,'Value');
385root_uid=1;
386if SubCampaignTest
387    %TO DO open an exoiting xml doc
388    [t,root_uid]=add(t,1,'element','SubCampaign');
389    t =attributes(t,'add',root_uid,'DirName',Campaign);
390end
391for iexp=1:length(List.Experiment)
392    set(handles.ListExperiments,'Value',iexp+1)
393    drawnow
394    test_mod=0;
395    [t,uid_exp]=add(t,root_uid,'element','Experiment');
396    t = attributes(t,'add',uid_exp,'i',num2str(iexp));
397    ExpName=List.Experiment{iexp}.name;
398    t = attributes(t,'add',uid_exp,'DirName',List.Experiment{iexp}.name);
399   
400    if isfield(List.Experiment{iexp},'Device')
401        for idevice=1:length(List.Experiment{iexp}.Device)
402            [t,uid_device]=add(t,uid_exp,'element','Device');
403            DeviceName=List.Experiment{iexp}.Device{idevice}.name;
404            t = attributes(t,'add',uid_device,'DirName',List.Experiment{iexp}.Device{idevice}.name);       
405            if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile')
406                for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile)
407                    FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml};
408                    [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,[],FileName,SubCampaignTest);
409                    if test
[651]410                        disp([List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} ' , Heading updated'])
[569]411                    end
412                    if isequal(Title,'ImaDoc')
413                        [t,uid_xml]=add(t,uid_device,'element','ImaDoc');
414                        t = attributes(t,'add',uid_xml,'source','file');
415                        [t]=add(t,uid_xml,'chardata',List.Experiment{iexp}.Device{idevice}.xmlfile{ixml});                   
416                    end
417                end
418             elseif isfield(List.Experiment{iexp}.Device{idevice},'Record')
419                for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record)
420                    RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name;
421                    [t,uid_record]=add(t,uid_device,'element','Record');
422                    t = attributes(t,'add',uid_record,'DirName',RecordName);
423                    if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile')
424                        for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile)
425                            FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml};
426                            [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,RecordName,FileName,SubCampaignTest);
427                            if test
[651]428                                disp([FileName ' , Heading updated'])
[569]429                            end
430                            [t,uid_xml]=add(t,uid_record,'element','ImaDoc');
431                            t = attributes(t,'add',uid_xml,'source','file');
432                            [t]=add(t,uid_xml,'chardata',FileName);
433                        end
434                    end
435                end
436            end
437        end
438    end
439end
440set(handles.ListExperiments,'Value',1)
441outputdir=get(handles.SourceDir,'String');
442[path,dirname]=fileparts(outputdir);
443outputfile=fullfile(outputdir,[dirname '.xml']);
444%campaigndoc(t);
445save(t,outputfile)
446
447
[1059]448
[569]449%------------------------------------------------------------------------
450% --- Executes on button press in OK.
[651]451%------------------------------------------------------------------------
[569]452function OK_Callback(hObject, eventdata, handles)
[651]453
[569]454if strcmp(get(handles.MirrorDir,'Visible'),'on')
455    Campaign=get(handles.MirrorDir,'String');
456else
457    Campaign=get(handles.SourceDir,'String');
458end
[931]459handles.output=[];
[569]460handles.output.Campaign=Campaign;
461Experiment=get(handles.ListExperiments,'String');
462IndicesExp=get(handles.ListExperiments,'Value');
463if ~isequal(IndicesExp,1)% if first element ('*') selected all the experiments are selected
464    Experiment=Experiment(IndicesExp);% use the selection of the list of experiments
465end
[651]466Experiment=regexprep(Experiment,'^\+/','');% remove the +/ used to mark dir
[1063]467Device=get(handles.DataSeries,'String');
468Value=get(handles.DataSeries,'Value');
[569]469Device=Device(Value);
[651]470Device=regexprep(Device,'^\+/','');% remove the +/ used to mark dir
[741]471Device=regexprep(Device,'^~','');% remove the ~ used to mark symbolic link
[569]472handles.output.Experiment=Experiment;
[651]473handles.output.DataSeries=Device;
[569]474guidata(hObject, handles);% Update handles structure
[581]475uiresume(handles.browse_data);
[569]476drawnow
477
[651]478%------------------------------------------------------------------------
479% --- Executes on button press in HELP.
480function HELP_Callback(hObject, eventdata, handles)
481path_to_uvmat=which ('uvmat');% check the path of uvmat
482pathelp=fileparts(path_to_uvmat);
483helpfile=fullfile(pathelp,'UVMAT_DOC','uvmat_doc.html');
484if isempty(dir(helpfile)), msgbox_uvmat('ERROR','Please put the help file uvmat_doc.html in the directory UVMAT/UVMAT_DOC')
[569]485else
[651]486web([helpfile '#dataview'])   
[569]487end
488
[651]489%------------------------------------------------------------------------
[581]490% --- Executes when user attempts to close browse_data.
[651]491%------------------------------------------------------------------------
[1059]492function closefcn(gcbo, eventdata)
493% if isequal(get(handles.browse_data, 'waitstatus'), 'waiting')
494%     % The GUI is still in UIWAIT, us UIRESUME
495%     handles.output = get(hObject,'String');
496%     guidata(hObject, handles); % Update handles structure
497%     uiresume(handles.browse_data);
498% else
499%     % The GUI is no longer waiting, just close it
500%     delete(handles.browse_data);
501% end
502hseries=findobj(allchild(0),'Tag','series');
503if ~isempty(hseries)
504    hreplicate=findobj(hseries,'Tag','Replicate');
505    set(hreplicate,'Value',0)
[569]506end
[1059]507hcalib=findobj(allchild(0),'Tag','geometry_calib');
508if ~isempty(hcalib)
509    hreplicate=findobj(hcalib,'Tag','Replicate');
510    set(hreplicate,'Value',0)
511end
[569]512
[651]513%------------------------------------------------------------------------
[569]514% --- Executes on key press over figure1 with no controls selected.
[651]515%------------------------------------------------------------------------
[581]516function browse_data_KeyPressFcn(hObject, eventdata, handles)
[651]517   
[569]518% Check for "enter" or "escape"
519if isequal(get(hObject,'CurrentKey'),'escape')
520    % User said no by hitting escape
521    handles.output = 'Cancel';
522   
523    % Update handles structure
524    guidata(hObject, handles);
525   
[581]526    uiresume(handles.browse_data);
[569]527end
528if isequal(get(hObject,'CurrentKey'),'return')
[581]529    uiresume(handles.browse_data);
[569]530end
[733]531
532
[1059]533% --- Executes on button press in Up.
534function Up_Callback(hObject, eventdata, handles)
535SourceDir=get(handles.SourceDir,'String');
536browse_data(SourceDir)
537
538
539% --- Executes on button press in Down.
540function Down_Callback(hObject, eventdata, handles)
541SourceDir=get(handles.SourceDir,'String');
542ListExperiments=get(handles.ListExperiments,'String');
543list_val=get(handles.ListExperiments,'Value');
544SourceFolder=regexprep(ListExperiments{list_val(1)},'+','');
545set(handles.SourceDir,'String',fullfile(SourceDir,SourceFolder))
[1063]546DataSeries=get(handles.DataSeries,'String');
547ValueDevice=get(handles.DataSeries,'Value');
548set(handles.ListExperiments,'String',DataSeries)
[1059]549set(handles.ListExperiments,'Value',ValueDevice)
550ListExperiments_Callback(hObject, [], handles)
[1063]551
552
553% --- Executes on selection change in DataSeries.
554function DataSeries_Callback(hObject, eventdata, handles)
555
556
557% --- Executes on button press in CheckDevices.
558function CheckDevices_Callback(hObject, eventdata, handles)
559if get(handles.CheckDevices,'Value')
560    set(handles.ListDevices,'Visible','on')
[1064]561    ListDevices=get(handles.DataSeries,'String');
562    Index=get(handles.DataSeries,'Value');
563    set(handles.ListDevices,'String',ListDevices)
564    set(handles.ListDevices,'Value',Index)
565    set(handles.DataSeries,'Value',1)
566    if strcmp(get(handles.MirrorDir,'Visible'),'on')
567    MirrorPath=get(handles.MirrorDir,'String');
568    else
569    MirrorPath=get(handles.SourceDir,'String');
570    end
571    IndexExperiment=get(handles.ListExperiments,'Value');
572    ListExperiment=get(handles.ListExperiments,'String');
573    Experiment=ListExperiment{get(handles.ListExperiments,'Value')};
574    Experiment=regexprep(Experiment,'^\+/','');% remove the +/ used to mark dir
575    Experiment=regexprep(Experiment,'^~','');% remove the ~ used to mark symbolic link
576    Device=regexprep(ListDevices{Index},'^\+/','');% remove the +/ used to mark dir
577    Device=regexprep(Device,'^~','');% remove the ~ used to mark symbolic link
578    DataSeries=dir(fullfile(MirrorPath,Experiment,Device));
579    DataSeriesCell=struct2cell(DataSeries);
580    set(handles.DataSeries,'String',DataSeriesCell(1,:)')
[1063]581else
[1064]582    ListDevices=get(handles.ListDevices,'String');
583    Index=get(handles.ListDevices,'Value');
[1063]584    set(handles.ListDevices,'Visible','off')
[1064]585    set(handles.DataSeries,'String',ListDevices)
586    set(handles.DataSeries,'Value',Index)
[1063]587end
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