%'browse_data': function for scanning directories in a campaign %------------------------------------------------------------------------ % function varargout = series(varargin) % associated with the GUI browse_data.fig %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % This file is part of the toolbox UVMAT. % % UVMAT is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published by % the Free Software Foundation; either version 2 of the License, or % (at your option) any later version. % % UVMAT is distributed in the hope that it will be useful, % but WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License (file UVMAT/COPYING.txt) for more details. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA function varargout = browse_data(varargin) % Last Modified by GUIDE v2.5 15-Feb-2013 19:41:48 % Begin initialization code - DO NOT EDIT gui_Singleton = 1; gui_State = struct('gui_Name', mfilename, ... 'gui_Singleton', gui_Singleton, ... 'gui_OpeningFcn', @browse_data_OpeningFcn, ... 'gui_OutputFcn', @browse_data_OutputFcn, ... 'gui_LayoutFcn', [] , ... 'gui_Callback', []); if nargin && ischar(varargin{1}) && ~isempty(regexp(varargin{1},'_Callback','once')) gui_State.gui_Callback = str2func(varargin{1}); end if nargout [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); else gui_mainfcn(gui_State, varargin{:}); end % End initialization code - DO NOT EDIT %------------------------------------------------------------------------ % --- Executes just before browse_data is made visible. function browse_data_OpeningFcn(hObject, eventdata, handles, Campaign) %------------------------------------------------------------------------ % Choose default command line output for browse_data handles.output = 'Cancel'; % Update handles structure guidata(hObject, handles); % Determine the position of the dialog - centered on the screen FigPos=get(0,'DefaultFigurePosition'); OldUnits = get(hObject, 'Units'); set(hObject, 'Units', 'pixels'); OldPos = get(hObject,'Position'); FigWidth = OldPos(3); FigHeight = OldPos(4); ScreenUnits=get(0,'Units'); set(0,'Units','pixels'); ScreenSize=get(0,'ScreenSize'); set(0,'Units',ScreenUnits); FigPos(1)=1/2*(ScreenSize(3)-FigWidth); FigPos(2)=2/3*(ScreenSize(4)-FigHeight); FigPos(3:4)=[FigWidth FigHeight]; set(hObject, 'Position', FigPos); set(hObject, 'Units', OldUnits); % % if exist('GeometryCalib','var') % DataviewData.GeometryCalib=GeometryCalib; % set(hObject,'UserData',DataviewData) % end if exist('Campaign','var') [CampaignPath,CampaignName]=fileparts(Campaign); RootXml=fullfile(Campaign,[CampaignName '.xml']); s=[]; if exist(RootXml,'file') [s,Heading]=xml2struct(RootXml);%read the xml file if isfield(s,'SourceDir') set(handles.SourceDir,'String',s.SourceDir);%display the source dir if a mirror has been opened set(handles.MirrorDir,'Visible','on');% mirror dir display set(handles.MirrorDir,'String',Campaign);%display the opened mirror dir set(handles.CreateMirror,'String','update_mirror') end end if isempty(s) %a source dir has been opened set(handles.SourceDir,'String',Campaign); set(handles.MirrorDir,'Visible','off');% no mirror dir display set(handles.CreateMirror,'String','create_mirror') end scan_campaign(handles,Campaign) % SourceDir_Callback([],[], handles) set(handles.edit_xml,'Visible','off') set(handles.HELP,'Visible','off') set(handles.OK,'Visible','on') set(handles.Cancel,'Visible','on') set(handles.figure,'WindowStyle','modal')% Make% Make the GUI modal set(hObject,'Visible','on') drawnow % UIWAIT makes GUI wait for user response (see UIRESUME) uiwait(handles.figure); end %------------------------------------------------------------------------ % --- Outputs from this function are returned to the command line. function varargout = browse_data_OutputFcn(hObject, eventdata, handles) %------------------------------------------------------------------------ % Get default command line output from handles structure varargout{1} = handles.output; delete(handles.figure) %------------------------------------------------------------------------ % --- Executes on button press in CreateMirror. function CreateMirror_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ SourceDir=get(handles.SourceDir,'String'); [SourcePath,ProjectName]=fileparts(SourceDir); if strcmp(get(handles.MirrorDir,'Visible'),'on') MirrorDir=get(handles.MirrorDir,'String'); else MirrorRoot=uigetdir('','select the dir which must contain the mirror directory, then press OK'); %file browser if ~ischar(MirrorRoot) return else MirrorDir=fullfile(MirrorRoot,ProjectName); end if ~exist(MirrorDir,'dir') mkdir(MirrorDir) end MirrorDoc.SourceDir=SourceDir; t=struct2xml(MirrorDoc); set(t,1,'name','DataTree'); save(t,fullfile(MirrorDir,[ProjectName '.xml'])) set(handles.MirrorDir,'String',MirrorDir) set(handles.MirrorDir,'Visible','on') end set(handles.SourceDir,'BackgroundColor',[1 1 0]) drawnow ExpName={''}; if exist(SourceDir,'dir') hdir=dir(SourceDir); %list files and dirs idir=0; for ilist=1:length(hdir) if hdir(ilist).isdir dirname=hdir(ilist).name; if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0') idir=idir+1; ExpName{idir}=hdir(ilist).name; mirror=fullfile(MirrorDir,ExpName{idir}); if ~exist(mirror,'dir') mkdir(mirror) end end % look for the list of 'devices' else %warning for isolated files end end set(handles.ListExperiments,'String',[{'*'};ExpName']) set(handles.ListExperiments,'Value',1) ListExperiments_Callback(hObject, eventdata, handles) else msgbox_uvmat('ERROR',['The input ' SourceDir ' is not a directory']) end set(handles.SourceDir,'BackgroundColor',[1 1 1]) %------------------------------------------------------------------------ function MirrorDir_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ MirrorDir=get(handles.MirrorDir,'String'); [tild,MirrorName]=fileparts(MirrorDir); s=xml2struct(fullfile(MirrorDir,[MirrorName '.xml'])); set(handles.SourceDir,'String',s.SourceDir) SourceDir_Callback([],[], handles) %------------------------------------------------------------------------ function scan_campaign(handles,Campaign) %------------------------------------------------------------------------ %set(handles.SourceDir,'BackgroundColor',[1 1 0]) drawnow %SourceDir=get(handles.SourceDir,'String'); %MirrorDir=get(handles.MirrorDir,'String'); ExpName={''}; if exist(Campaign,'dir') hdir=dir(Campaign); %list files and dirs idir=0; for ilist=1:length(hdir) if hdir(ilist).isdir dirname=hdir(ilist).name; if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0') idir=idir+1; ExpName{idir}=hdir(ilist).name; end end end set(handles.ListExperiments,'String',[{'*'};ExpName']) set(handles.ListExperiments,'Value',1) ListExperiments_Callback([],[], handles) else msgbox_uvmat('ERROR',['The input ' Campaign ' is not a directory']) end %set(handles.SourceDir,'BackgroundColor',[1 1 1]) %------------------------------------------------------------------------ % --- Executes on selection change in ListExperiments. function ListExperiments_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ if strcmp(get(handles.MirrorDir,'Visible'),'on') CampaignPath=get(handles.MirrorDir,'String'); else CampaignPath=get(handles.SourceDir,'String'); end % MirrorPath=get(handles.MirrorDir,'String'); ListExperiments=get(handles.ListExperiments,'String'); list_val=get(handles.ListExperiments,'Value'); if isequal(list_val(1),1) ListExperiments=ListExperiments(2:end); %choose all experiments testList=1; set(handles.ListExperiments,'Value',1) else ListExperiments=ListExperiments(list_val);%choose selected experiments testList=0; end scan_experiments(handles,ListExperiments,CampaignPath) %------------------------------------------------------------------------ % --- Executes on selection change in ListExperiments. function scan_experiments(handles,ListExperiments,CampaignPath,MirrorPath) %------------------------------------------------------------------------ ListDevices={}; for iexp=1:numel(ListExperiments) hdir=dir(fullfile(CampaignPath,ListExperiments{iexp})); %list files and dir in the experiment directory idir=0; for ilist=1:length(hdir) if ~isequal(hdir(ilist).name(1),'.') DataSeries=fullfile(CampaignPath,ListExperiments{iexp},hdir(ilist).name); if exist('MirrorPath','var') mirror=fullfile(MirrorPath,ListExperiments{iexp},hdir(ilist).name); if ~exist(mirror)% create mirror if needed system(['ln -s ' source ' ' mirror]) end end check_list=strcmp(hdir(ilist).name,ListDevices); if isempty(find(check_list, 1)) ListDevices=[ListDevices;hdir(ilist).name]; end end end end set(handles.ListDevices,'String',ListDevices) %------------------------------------------------------------------------ % --- Executes on button press in update_headings. function ListDevices_Callback(hObject, eventdata, handles) % CurrentPath=get(handles.SourceDir,'String'); % ListExperiments=get(handles.ListExperiments,'String'); % list_val=get(handles.ListExperiments,'Value'); % if isequal(list_val,1) % ListExperiments=ListExperiments(2:end); % else % ListExperiments=ListExperiments(list_val); % end % set(handles.ListRecords,'Value',1) % set(handles.ListXml,'Value',1) % ListDevices=get(handles.ListDevices,'String'); % list_val=get(handles.ListDevices,'Value'); % if isequal(list_val,1) % ListDevices=ListDevices(2:end); % else % ListDevices=ListDevices(list_val); % end % [ListDevices,ListRecords,ListXml]=ListDir(CurrentPath,ListExperiments,ListDevices,{}); % set(handles.ListRecords,'String',[{'*'};ListRecords']) % set(handles.ListXml,'String',[{'*'};ListXml']) % % % if strcmp(get(handles.MirrorDir,'Visible'),'on') % CurrentPath=get(handles.MirrorDir,'String'); % else % CurrentPath=get(handles.SourceDir,'String'); % end % ListDevices=get(handles.ListDevices,'String'); % Device=ListDevices(get(handles.ListDevices,'Value')); % % else % hdir=dir(fullfile(SourcePath,Device)); %list files and dirs %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %------------------------------------------------------------------------ % --- Executes on selection change in ListRecords. function ListRecords_Callback(hObject, eventdata, handles) Value=get(handles.ListRecords,'Value'); if isequal(Value(1),1) set(handles.ListRecords,'Value',1); end %------------------------------------------------------------------------ % --- Executes on button press in CampaignDoc. function CampaignDoc_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ answer=msgbox_uvmat('INPUT_Y-N','This function will update the global xml rpresentation of the data set and the Heading of each xml file') if ~isequal(answer{1},'OK') return end set(handles.ListExperiments,'Value',1) ListExperiments_Callback(hObject, eventdata, handles)%update the overview of the experiment directories DataviewData=get(handles.figure,'UserData'); List=DataviewData.List; Currentpath=get(handles.SourceDir,'String'); [Currentpath,Campaign,DirExt]=fileparts(Currentpath); Campaign=[Campaign DirExt]; t=xmltree; t=set(t,1,'name','CampaignDoc'); t = attributes(t,'add',1,'source','directory'); SubCampaignTest=get(handles.SubCampaignTest,'Value'); root_uid=1; if SubCampaignTest %TO DO open an exoiting xml doc [t,root_uid]=add(t,1,'element','SubCampaign'); t =attributes(t,'add',root_uid,'DirName',Campaign); end for iexp=1:length(List.Experiment) set(handles.ListExperiments,'Value',iexp+1) drawnow test_mod=0; [t,uid_exp]=add(t,root_uid,'element','Experiment'); t = attributes(t,'add',uid_exp,'i',num2str(iexp)); ExpName=List.Experiment{iexp}.name; t = attributes(t,'add',uid_exp,'DirName',List.Experiment{iexp}.name); if isfield(List.Experiment{iexp},'Device') for idevice=1:length(List.Experiment{iexp}.Device) [t,uid_device]=add(t,uid_exp,'element','Device'); DeviceName=List.Experiment{iexp}.Device{idevice}.name; t = attributes(t,'add',uid_device,'DirName',List.Experiment{iexp}.Device{idevice}.name); if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,[],FileName,SubCampaignTest); if test [List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} ' , Heading updated'] end if isequal(Title,'ImaDoc') [t,uid_xml]=add(t,uid_device,'element','ImaDoc'); t = attributes(t,'add',uid_xml,'source','file'); [t]=add(t,uid_xml,'chardata',List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}); end end elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; [t,uid_record]=add(t,uid_device,'element','Record'); t = attributes(t,'add',uid_record,'DirName',RecordName); if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,RecordName,FileName,SubCampaignTest); if test [FileName ' , Heading updated'] end [t,uid_xml]=add(t,uid_record,'element','ImaDoc'); t = attributes(t,'add',uid_xml,'source','file'); [t]=add(t,uid_xml,'chardata',FileName); end end end end end end end set(handles.ListExperiments,'Value',1) outputdir=get(handles.SourceDir,'String'); [path,dirname]=fileparts(outputdir); outputfile=fullfile(outputdir,[dirname '.xml']); %campaigndoc(t); save(t,outputfile) %------------------------------------------------------------------------ % --- Executes on button press in CampaignDoc. function edit_xml_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ CurrentPath=get(handles.SourceDir,'String'); %[CurrentPath,Name,Ext]=fileparts(CurrentDir); ListExperiments=get(handles.ListExperiments,'String'); Value=get(handles.ListExperiments,'Value'); if ~isequal(Value,1) ListExperiments=ListExperiments(Value); end ListDevices=get(handles.ListDevices,'String'); Value=get(handles.ListDevices,'Value'); if ~isequal(Value,1) ListDevices=ListDevices(Value); end ListRecords=get(handles.ListRecords,'String'); Value=get(handles.ListRecords,'Value'); if ~isequal(Value,1) ListRecords=ListRecords(Value); end [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); ListXml=get(handles.ListXml,'String'); Value=get(handles.ListXml,'Value'); set(handles.ListXml,'Value',Value(1)); if isequal(Value(1),1) msgbox_uvmat('ERROR','an xml file needs to be selected') return else XmlName=ListXml{Value(1)}; end for iexp=1:length(List.Experiment) ExpName=List.Experiment{iexp}.name; if isfield(List.Experiment{iexp},'Device') for idevice=1:length(List.Experiment{iexp}.Device) DeviceName=List.Experiment{iexp}.Device{idevice}.name; if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} if isequal(FileName,XmlName) editxml(fullfile(CurrentPath,ExpName,DeviceName,FileName)); return end end elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; if isequal(FileName,XmlName) editxml(fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName)); return end end end end end end end end %%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % CurrentPath/Campaign: root directory function [Title,test_mod]=check_heading(Currentpath,Campaign,Experiment,Device,Record,xmlname,testSubCampaign) %Shema for Heading: % Campaign % (SubCampaign) % Experiment % Device % (Record) % ImageName % DateExp % old: %Project: suppressed ( changed to Campaign) %Exp: suppressed (changed to experiment) %ImaNames: changed to ImageName if exist('Record','var') && ~isempty(Record) xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,Record,xmlname); testrecord=1; else xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,xmlname); testrecord=0; end if ~exist('testSubCampaign','var') testSubCampaign=0; end if testSubCampaign SubCampaign=Campaign; [Currentpath,Campaign,DirExt]=fileparts(Currentpath); Campaign=[Campaign DirExt]; end test_mod=0; %test for the modification of the xml file t_device=xmltree(xmlfullname); Title=get(t_device,1,'name'); uid_child=children(t_device,1); Heading_old=[]; uidheading=0; for ilist=1:length(uid_child) name=get(t_device,uid_child(ilist),'name'); if isequal(name,'Heading') uidheading=uid_child(ilist); end end if uidheading subt=branch(t_device,uidheading); Heading_old=convert(subt); else return % do not edit xml files without element 'Heading' end if ~(isfield(Heading_old,'Campaign')&& isequal(Heading_old.Campaign,Campaign)) test_mod=1; end Heading.Campaign=Campaign; if testSubCampaign if ~(isfield(Heading_old,'SubCampaign')&& isequal(Heading_old.SubCampaign,SubCampaign)) test_mod=1; end Heading.SubCampaign=SubCampaign; end if ~(isfield(Heading_old,'Experiment')&& isequal(Heading_old.Experiment,Experiment)) test_mod=1; end Heading.Experiment=Experiment; if ~(isfield(Heading_old,'Device')&& isequal(Heading_old.Device,Device)) test_mod=1; end Heading.Device=Device; if testrecord if ~(isfield(Heading_old,'Record')&& isequal(Heading_old.Record,Record)) test_mod=1; end Heading.Record=Record; end if isfield(Heading_old,'ImaNames') test_mod=1; if ~isempty(Heading_old.ImaNames) Heading.ImageName=Heading_old.ImaNames; end end if isfield(Heading_old,'ImageName')&& ~isempty(Heading_old.ImageName) Heading.ImageName=Heading_old.ImageName; end if isfield(Heading_old,'DateExp')&& ~isempty(Heading_old.DateExp) Heading.DateExp=Heading_old.DateExp; end if test_mod && uidheading uid_child=children(t_device,uidheading); t_device=delete(t_device,uid_child); t_device=struct2xml(Heading,t_device,uidheading); backupfile=xmlfullname; testexist=2; while testexist==2 backupfile=[backupfile '~']; testexist=exist(backupfile,'file'); end [success,message]=copyfile(xmlfullname,backupfile);%make backup if isequal(success,1) delete(xmlfullname) else return end save(t_device,xmlfullname) end %------------------------------------------------------------------------ % --- Executes on button press in HELP. function HELP_Callback(hObject, eventdata, handles) path_to_uvmat=which ('uvmat')% check the path of uvmat pathelp=fileparts(path_to_uvmat); helpfile=fullfile(pathelp,'UVMAT_DOC','uvmat_doc.html'); if isempty(dir(helpfile)), msgbox_uvmat('ERROR','Please put the help file uvmat_doc.html in the directory UVMAT/UVMAT_DOC') else web([helpfile '#dataview']) end % --- Executes on selection change in ListXml. function ListXml_Callback(hObject, eventdata, handles) Value=get(handles.ListXml,'Value'); if isequal(Value(1),1) set(handles.ListXml,'Value',1); end % --- Executes on button press in clean_civ_cmx. function clean_civ_cmx_Callback(hObject, eventdata, handles) message='this function will delete all files with extensions .log, .bat, .cmx,.cmx2,.errors in the input directory(ies)'; answer=msgbox_uvmat('INPUT_Y-N',message); if ~isequal(answer,'Yes') return end set(handles.ListExperiments,'Value',1) ListExperiments_Callback(hObject, eventdata, handles)%update the overview of the experiment directories DataviewData=get(handles.figure,'UserData') List=DataviewData.List; Currentpath=get(handles.SourceDir,'String'); [Currentpath,Campaign,DirExt]=fileparts(Currentpath); Campaign=[Campaign DirExt]; SubCampaignTest=get(handles.SubCampaignTest,'Value'); nbdelete_tot=0; for iexp=1:length(List.Experiment) set(handles.ListExperiments,'Value',iexp+1) drawnow test_mod=0; ExpName=List.Experiment{iexp}.name; nbdelete=0; if isfield(List.Experiment{iexp},'Device') for idevice=1:length(List.Experiment{iexp}.Device) DeviceName=List.Experiment{iexp}.Device{idevice}.name; if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') currentdir=fullfile(Currentpath,Campaign,ExpName,DeviceName); hdir=dir(currentdir); %list files and dirs idir=0; for ilist=1:length(hdir) if hdir(ilist).isdir dirname=hdir(ilist).name; if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0') CivDir=fullfile(currentdir,dirname) hCivDir=dir(CivDir); for ilist=1:length(hCivDir) FileName=hCivDir(ilist).name; [dd,ff,Ext]=fileparts(FileName); if isequal(Ext,'.log')||isequal(Ext,'.bat')||isequal(Ext,'.cmx')||isequal(Ext,'.cmx2')|| isequal(Ext,'.errors') delete(fullfile(CivDir,FileName)) nbdelete=nbdelete+1; end end end end end elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') 'look at subdirectories' end end end end end display([num2str(nbdelete) ' files deleted']) nbdelete_tot=nbdelete_tot+nbdelete; end msgbox_uvmat('CONFIRMATION',['END: ' num2str(nbdelete_tot) ' files deleted by clean_civ_cmx']) set(handles.ListExperiments,'Value',1) % --- Executes on button press in OK. function OK_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ if strcmp(get(handles.MirrorDir,'Visible'),'on') Campaign=get(handles.MirrorDir,'String'); else Campaign=get(handles.SourceDir,'String'); end handles.output.Campaign=Campaign; Experiment=get(handles.ListExperiments,'String'); IndicesExp=get(handles.ListExperiments,'Value'); if ~isequal(IndicesExp,1)% if first element ('*') selected all the experiments are selected Experiment=Experiment(IndicesExp);% use the selection of the list of experiments end Device=get(handles.ListDevices,'String'); Value=get(handles.ListDevices,'Value'); Device=Device(Value); handles.output.Experiment=Experiment; handles.output.Device=Device; guidata(hObject, handles);% Update handles structure uiresume(handles.figure); drawnow return % ListRecords=get(handles.ListRecords,'String'); % Value=get(handles.ListRecords,'Value'); % if ~isequal(Value,1) % ListRecords=ListRecords(Value); % end %[ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices); ListXml=get(handles.ListXml,'String'); Value=get(handles.ListXml,'Value'); if isequal(Value,1) msgbox_uvmat('ERROR','you need to select in the GUI browse_data the xml files to edit') return else ListXml=ListXml(Value); end %update all the selected xml files DataviewData=get(handles.figure,'UserData'); % answer=msgbox_uvmat('INPUT_Y-N',[num2str(length(Value)) ' xml files for device ' ListDevices{1} ' will be refreshed with ' ... % DataviewData.GeometryCalib.CalibrationType ' calibration data']) % if ~isequal(answer,'Yes') % return % end %List.Experiment{1}.Device{1} %List.Experiment{2}.Device{1} for iexp=1:length(List.Experiment) ExpName=List.Experiment{iexp}.name; set(handles.ListExperiments,'Value',IndicesExp(iexp)); if isfield(List.Experiment{iexp},'Device') for idevice=1:length(List.Experiment{iexp}.Device) DeviceName=List.Experiment{iexp}.Device{idevice}.name; if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; for ilistxml=1:length(ListXml) if isequal(FileName,ListXml{ilistxml}) set(handles.ListXml,'Value',Value(ilistxml)) drawnow xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,FileName); update_imadoc(DataviewData.GeometryCalib,xmlfullname) display([xmlfullname ' updated']) break end end end elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; for ilistxml=1:length(ListXml) if isequal(FileName,ListXml{ilistxml}) set(handles.ListXml,'Value',Value(ilistxml)) drawnow xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName); update_imadoc(DataviewData.GeometryCalib,xmlfullname) display([xmlfullname ' updated']) break end end end end end end end end end set(handles.ListXml,'Value',Value) % % % % % % % % CurrentPath=get(handles.SourceDir,'String');%= get(hObject,'String'); % ListExperiments=get(handles.ListExperiments,'String'); % Value=get(handles.ListExperiments,'Value'); % if ~isequal(Value,1) % ListExperiments=ListExperiments(Value); % end % ListDevices=get(handles.ListDevices,'String'); % Value=get(handles.ListDevices,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','manually select in the GUI browse_data the device being calibrated') % return % else % ListDevices=ListDevices(Value); % end % ListRecords=get(handles.ListRecords,'String'); % Value=get(handles.ListRecords,'Value'); % if ~isequal(Value,1) % ListRecords=ListRecords(Value); % end % [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); % ListXml=get(handles.ListXml,'String'); % Value=get(handles.ListXml,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','you need to select in the GUI browse_data the xml files to edit') % return % else % ListXml=ListXml(Value); % end % handles.output.CurrentPath=CurrentPath; % handles.output.ListExperiments=ListExperiments; % handles.output.ListDevices=ListDevices; % handles.output.ListRecords=ListRecords; % handles.output.ListXml=ListXml; % handles.output.List=List; % handles.output ='OK, Calibration replicated'; % guidata(hObject, handles);% Update handles structure % uiresume(handles.figure); % --- Executes on button press in Cancel. function Cancel_Callback(hObject, eventdata, handles) handles.output = get(hObject,'String'); guidata(hObject, handles); % Update handles structure % Use UIRESUME instead of delete because the OutputFcn needs uiresume(handles.figure); % --- Executes when user attempts to close figure. function figure_CloseRequestFcn(hObject, eventdata, handles) if isequal(get(handles.figure, 'waitstatus'), 'waiting') % The GUI is still in UIWAIT, us UIRESUME uiresume(handles.figure); else % The GUI is no longer waiting, just close it delete(handles.figure); end % --- Executes on key press over figure1 with no controls selected. function figure_KeyPressFcn(hObject, eventdata, handles) % Check for "enter" or "escape" if isequal(get(hObject,'CurrentKey'),'escape') % User said no by hitting escape handles.output = 'Cancel'; % Update handles structure guidata(hObject, handles); uiresume(handles.figure); end if isequal(get(hObject,'CurrentKey'),'return') uiresume(handles.figure); end