source: trunk/src/browse_data.m @ 856

Last change on this file since 856 was 856, checked in by sommeria, 6 years ago

civtest_implemented_civ2

File size: 29.8 KB
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1%'browse_data': function for scanning directories in a campaign
2%------------------------------------------------------------------------
3% function varargout = series(varargin)
4% associated with the GUI browse_data.fig
5
6%=======================================================================
7% Copyright 2008-2014, LEGI UMR 5519 / CNRS UJF G-INP, Grenoble, France
8%   http://www.legi.grenoble-inp.fr
9%   Joel.Sommeria - Joel.Sommeria (A) legi.cnrs.fr
10%
11%     This file is part of the toolbox UVMAT.
12%
13%     UVMAT is free software; you can redistribute it and/or modify
14%     it under the terms of the GNU General Public License as published
15%     by the Free Software Foundation; either version 2 of the license,
16%     or (at your option) any later version.
17%
18%     UVMAT is distributed in the hope that it will be useful,
19%     but WITHOUT ANY WARRANTY; without even the implied warranty of
20%     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
21%     GNU General Public License (see LICENSE.txt) for more details.
22%=======================================================================
23
24function varargout = browse_data(varargin)
25
26% Last Modified by GUIDE v2.5 24-Jan-2015 16:55:04
27
28% Begin initialization code - DO NOT EDIT
29gui_Singleton = 1;
30gui_State = struct('gui_Name',       mfilename, ...
31                   'gui_Singleton',  gui_Singleton, ...
32                   'gui_OpeningFcn', @browse_data_OpeningFcn, ...
33                   'gui_OutputFcn',  @browse_data_OutputFcn, ...
34                   'gui_LayoutFcn',  [] , ...
35                   'gui_Callback',   []);
36if nargin && ischar(varargin{1}) && ~isempty(regexp(varargin{1},'_Callback','once'))             
37    gui_State.gui_Callback = str2func(varargin{1});
38end
39
40if nargout
41    [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
42else
43    gui_mainfcn(gui_State, varargin{:});
44end
45% End initialization code - DO NOT EDIT
46
47%------------------------------------------------------------------------
48% --- Executes just before browse_data is made visible.
49function browse_data_OpeningFcn(hObject, eventdata, handles, DataSeries,EnableMirror)
50%------------------------------------------------------------------------
51
52%% Choose default command line output for browse_data
53handles.output = 'Cancel';
54
55%% Update handles structure
56guidata(hObject, handles);
57set(hObject,'WindowButtonDownFcn',{'mouse_down'}) % allows mouse action with right button (zoom for uicontrol display)
58
59%% Determine the position of the dialog - centered on the screen
60FigPos=get(0,'DefaultFigurePosition');
61OldUnits = get(hObject, 'Units');
62set(hObject, 'Units', 'pixels');
63OldPos = get(hObject,'Position');
64FigWidth = OldPos(3);
65FigHeight = OldPos(4);
66ScreenUnits=get(0,'Units');
67set(0,'Units','pixels');
68ScreenSize=get(0,'ScreenSize');
69set(0,'Units',ScreenUnits);
70FigPos(1)=1/2*(ScreenSize(3)-FigWidth);
71FigPos(2)=2/3*(ScreenSize(4)-FigHeight);
72FigPos(3:4)=[FigWidth FigHeight];
73set(hObject, 'Position', FigPos);
74set(hObject, 'Units', OldUnits);
75if exist('EnableMirror','var') && strcmp(EnableMirror,'on')
76    set(handles.CreateMirror,'Visible','on')
77    set(handles.mirror_txt,'Visible','on')
78else
79    set(handles.CreateMirror,'Visible','off')
80    set(handles.mirror_txt,'Visible','off')
81end
82
83%% initialize the GUI
84if ~(exist('DataSeries','var') && exist(DataSeries,'dir'))
85    DataSeries=pwd;% current dir is the starting data series by default
86end
87[Experiment,DataSeries,Ext]=fileparts(DataSeries);
88DataSeries=[DataSeries Ext];
89[Campaign,Experiment,Ext]=fileparts(Experiment);
90Experiment=[Experiment Ext];
91[tild,CampaignName]=fileparts(Campaign);
92RootXml=fullfile(Campaign,[CampaignName '.xml']);
93s=[];
94if exist(RootXml,'file')
95    [s,Heading]=xml2struct(RootXml);%read the xml file
96    if isfield(s,'SourceDir')
97        set(handles.SourceDir,'String',s.SourceDir);%display the source dir if a mirror has been opened
98        set(handles.MirrorDir,'Visible','on');%  mirror dir display
99        set(handles.MirrorDir,'String',Campaign);%display the opened mirror dir
100        set(handles.CreateMirror,'String','update_mirror')
101    end
102end
103if isempty(s) %a source dir has been opened
104    set(handles.SourceDir,'String',Campaign);
105    set(handles.MirrorDir,'Visible','off');% no mirror dir display
106    set(handles.CreateMirror,'String','create_mirror')
107end
108errormsg=scan_campaign(handles,Campaign,Experiment,DataSeries);
109if ~isempty(errormsg)
110    msgbox_uvmat('ERROR',errormsg)
111    return
112end
113set(handles.OK,'Visible','on')
114set(handles.Cancel,'Visible','on')
115
116set(handles.browse_data,'WindowStyle','modal')% Make the GUI modal
117set(hObject,'Visible','on')
118drawnow
119% UIWAIT makes GUI wait for user response (see UIRESUME)
120uiwait(handles.browse_data);
121
122
123
124%------------------------------------------------------------------------
125% --- Outputs from this function are returned to the command line.
126function varargout = browse_data_OutputFcn(hObject, eventdata, handles)
127%------------------------------------------------------------------------
128% Get default command line output from handles structure
129varargout{1} = handles.output;
130delete(handles.browse_data)
131
132%------------------------------------------------------------------------
133% --- Executes on button press in CreateMirror.
134function CreateMirror_Callback(hObject, eventdata, handles)
135%------------------------------------------------------------------------
136set(handles.SourceDir,'BackgroundColor',[1 1 0])% indicate action of button by yellow color
137drawnow
138SourceDir=get(handles.SourceDir,'String');
139[SourcePath,ProjectName]=fileparts(SourceDir);
140if strcmp(get(handles.MirrorDir,'Visible'),'on')
141    MirrorDir=get(handles.MirrorDir,'String');% name of the mirror folder
142else% create the mirror folder if it does not exist
143    MirrorRoot=uigetfile_uvmat('select the folder which must contain the mirror directory:',SourcePath,'uigetdir');
144    if isempty(MirrorRoot)
145        return
146    elseif strcmp(MirrorRoot,SourcePath)
147        msgbox_uvmat('ERROR','The mirror folder must be different from the source')
148        return
149    else
150        MirrorDir=fullfile(MirrorRoot,ProjectName);
151    end
152    if exist(MirrorDir,'dir')
153        msgbox_uvmat('ERROR',['The folder ' MirrorDir ' chosen as new mirror campaign already exists'])
154        return
155    else
156        [s,errormsg]=mkdir(MirrorDir)% create the mirror dir
157        if s~=1
158            msgbox_uvmat('ERROR',['error in creating ' MirrorDir ': ' errormsg])
159            return
160        end
161    end
162    MirrorDoc.SourceDir=SourceDir;
163    t=struct2xml(MirrorDoc);
164    set(t,1,'name','DataTree');
165    save(t,fullfile(MirrorDir,[ProjectName '.xml']))% create an xml file in the mirror folder to indicate its source folder
166    set(handles.MirrorDir,'String',MirrorDir)
167    set(handles.MirrorDir,'Visible','on')
168    set(handles.CreateMirror,'String','update_mirror')
169end
170ExpName={''};
171
172%% update the mirror from the source dir
173if exist(SourceDir,'dir')
174    hdir=dir(SourceDir); %list files and dirs
175    idir=0;
176    for ilist=1:length(hdir)
177        if hdir(ilist).isdir% scan all subfolders
178            dirname=hdir(ilist).name;%
179            if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0')%skip subfolder beginning by '0'
180                idir=idir+1;
181                mirror=fullfile(MirrorDir,hdir(ilist).name);% corresponding name in the mirror
182                if ~exist(mirror,'dir')
183                   mkdir(mirror)% create the mirror folder if it does not exist
184                end
185                ExpName{idir}=['+/' hdir(ilist).name];% insert '+/' in the list to show that it is a folder
186            end
187            % look for the list of 'devices'
188        else
189            %warning for isolated files
190        end
191    end
192    set(handles.ListExperiments,'String',[{'*'};ExpName'])
193    set(handles.ListExperiments,'Value',1)
194     update_experiments(handles,[{'*'};ExpName'],SourceDir,MirrorDir)
195   % ListExperiments_Callback(hObject, eventdata, handles) % list the content of the experiment
196else
197    msgbox_uvmat('ERROR',['The input ' SourceDir ' is not a directory'])
198end
199set(handles.SourceDir,'BackgroundColor',[1 1 1])
200
201%------------------------------------------------------------------------
202% List the experiments in a campaign, filling the menu ListExperiments
203%------------------------------------------------------------------------
204function errormsg=scan_campaign(handles,Campaign,Experiment,DataSeries)
205%------------------------------------------------------------------------
206errormsg='';
207if exist(Campaign,'dir')
208    ListStruct=dir(Campaign); %list files and dirs
209    if numel(ListStruct)>1000% A campaign folder must contain maily a list of 'experiment' sub-folders
210        errormsg=[Campaign ' contains too many items (>1000) to be a Campaign folder'];
211        return
212    end
213    ListCells=struct2cell(ListStruct);% transform dir struct to a cell arrray
214    ListFiles=ListCells(1,:);%list of dir and file  names
215    check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
216    ListFiles(check_dir)=regexprep(ListFiles(check_dir),'^.+','+/$0');% put '+/' in front of dir name display
217    cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
218    check_keep=cellfun('isempty', cell_remove);
219    ListFiles=sort((ListFiles(check_keep))');
220    index=find(strcmp(['+/' Experiment],ListFiles));
221    if isempty(index), index=0; end
222    set(handles.ListExperiments,'String',[{'*'};ListFiles])
223    set(handles.ListExperiments,'Value',index+1)% initialise the menu selection with the folder defined by the input
224    ListExperiments_Callback([],[], handles)
225    ListDevices=get(handles.ListDevices,'String');
226    index=find(strcmp(['+/' DataSeries],ListDevices));
227    if isempty(index)
228        index=find(strcmp(['~/' DataSeries],ListDevices));
229    end
230    if ~isempty(index)
231          set(handles.ListDevices,'Value',index)
232    end
233else
234    msgbox_uvmat('ERROR',['The input ' Campaign ' is not a directory'])
235end
236
237%------------------------------------------------------------------------
238% --- Executes on selection change in ListExperiments.
239%------------------------------------------------------------------------
240 function ListExperiments_Callback(hObject, eventdata, handles)
241
242if strcmp(get(handles.MirrorDir,'Visible'),'on')
243    MirrorPath=get(handles.MirrorDir,'String');
244else
245    MirrorPath=get(handles.SourceDir,'String');
246end
247ListExperiments=get(handles.ListExperiments,'String');
248list_val=get(handles.ListExperiments,'Value');
249if isequal(list_val(1),1)
250    ListExperiments=ListExperiments(2:end); %choose all experiments if the first line '*' is selected
251    set(handles.ListExperiments,'Value',1)
252else
253    ListExperiments=ListExperiments(list_val);%choose selected experiments
254end
255list_dataseries(handles,ListExperiments,MirrorPath)
256
257%------------------------------------------------------------------------
258% --- List the DataSeries when a set of experiments is selected
259%------------------------------------------------------------------------
260 function list_dataseries(handles,ListExperiments,MirrorPath)
261
262ListDevices={};
263for iexp=1:numel(ListExperiments)
264    if strcmp(ListExperiments{iexp}(1),'+')% if the item is a directory
265        ListExperiments{iexp}(1)=[];%remove the first char '+' used to mark folders
266        ListStruct=dir(fullfile(MirrorPath,ListExperiments{iexp})); %list files and dir in the source experiment directory
267        ListCells=struct2cell(ListStruct);%transform dir struct to a cell arrray
268        ListFiles=ListCells(1,:);%list of dir and file  names
269        cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
270        check_keep=cellfun('isempty', cell_remove);
271        check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
272        for ilist=1:numel(ListFiles)
273            if check_keep(ilist)% loop on eligible DataSeries folders
274                mirror=fullfile(MirrorPath,ListExperiments{iexp},ListFiles{ilist});%source folder
275                if ~exist(mirror,'file') && ~exist(mirror,'dir')% if the name is a broken link
276                    delete(mirror)% delete broken link
277                else %update the list of dataSeries
278                    [tild,msg]=fileattrib(mirror);
279                    if ~strcmp(msg.Name,mirror)% if it is a link
280                        ListFiles{ilist}=['~' ListFiles{ilist}];%mark link by '@' in the list
281                    end
282                    if check_dir(ilist)
283                        ListFiles{ilist}=['+/' ListFiles{ilist}];%mark dir by '+' in the list
284                    end
285                    if isempty(find(strcmp(ListFiles{ilist},ListDevices), 1))% if the item is not already in ListDevices
286                        ListDevices=[ListDevices;ListFiles{ilist}]; %append the item to the list
287                    end                   
288                end
289            end
290        end
291    end
292end
293set(handles.ListDevices,'String',sort(ListDevices))
294
295%------------------------------------------------------------------------
296% --- Executes when the mirror is created or updated
297%------------------------------------------------------------------------
298 function update_experiments(handles,ListExperiments,CampaignPath,MirrorPath)
299
300ListDevices={};
301for iexp=1:numel(ListExperiments)
302    if strcmp(ListExperiments{iexp}(1),'+')% if the item is a directory
303        ListExperiments{iexp}(1)=[];
304        ListStruct=dir(fullfile(CampaignPath,ListExperiments{iexp})); %list files and dir in the source experiment directory
305        ListCells=struct2cell(ListStruct);%transform dir struct to a cell arrray
306        ListFiles=ListCells(1,:);%list of dir and file  names
307        cell_remove=regexp(ListFiles,'^(-|\.|\+/\.)');% detect strings beginning by '-' ,'.' or '+/.'(dir beginning by . )
308        check_keep=cellfun('isempty', cell_remove);
309        check_dir=cell2mat(ListCells(4,:));% =1 for directories, =0 for files
310        for ilist=1:numel(ListFiles)
311            if check_keep(ilist)% loop on eligible DataSeries folders
312                DataSeries=fullfile(CampaignPath,ListExperiments{iexp},ListFiles{ilist});%source folder
313                if ~isempty(MirrorPath)
314                    mirror=fullfile(MirrorPath,ListExperiments{iexp},ListFiles{ilist});
315                    if exist(mirror,'file')% if mirror already exists as a file or folder
316                        [tild,msg]=fileattrib(mirror);
317                        if strcmp(msg.Name,mirror)%if the mirror name already exists as a local file or dir
318                            if msg.directory% case of a folder
319                                answer=msgbox_uvmat('INPUT_Y-N',['replace local folder ' msg.Name ' by a link to the source dir']);
320                                if strcmp(answer,'Yes')
321                                    [ss,msg]=rmdir(mirror);
322                                    if ss==1
323                                        system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder
324                                    else
325                                        msgbox_uvmat('ERROR',['enable to delete local folder: ' msg]);
326                                    end
327                                end
328                            else % case of an existing mirror file
329                                answer=msgbox_uvmat('INPUT_Y-N',['replace local file ' msg.Name ' by a link to the source file']);
330                                if strcmp(answer,'Yes')
331                                    delete(mirror);
332                                    system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder                                 
333                                end
334                            end
335                        end
336                    else% create mirror to the data series if needed
337                        system(['ln -s ' DataSeries ' ' mirror]); % create the link to the source folder                     
338                    end
339                    if isempty(find(strcmp(ListFiles{ilist},ListDevices), 1))% if the item is not already in ListDevices
340                        if check_dir(ilist)
341                            ListFiles{ilist}=['+/' ListFiles{ilist}];%mark dir by '+' in the list
342                        end
343                        ListDevices=[ListDevices;ListFiles{ilist}]; %append the item to the list
344                    end
345                end
346            end
347        end
348    end
349end
350set(handles.ListDevices,'String',sort(ListDevices))
351
352%------------------------------------------------------------------------
353% --- Executes on button press in CampaignDoc.
354function CampaignDoc_Callback(hObject, eventdata, handles)
355%------------------------------------------------------------------------   
356answer=msgbox_uvmat('INPUT_Y-N','This function will update the global xml rpresentation of the data set and the Heading of each xml file');
357if ~isequal(answer{1},'OK')
358    return
359end
360set(handles.ListExperiments,'Value',1)
361ListExperiments_Callback(hObject, eventdata, handles)%update the overview of the experiment directories
362DataviewData=get(handles.browse_data,'UserData');
363List=DataviewData.List;
364Currentpath=get(handles.SourceDir,'String');
365[Currentpath,Campaign,DirExt]=fileparts(Currentpath);
366Campaign=[Campaign DirExt];
367t=xmltree;
368t=set(t,1,'name','CampaignDoc');
369t = attributes(t,'add',1,'source','directory');
370SubCampaignTest=get(handles.SubCampaignTest,'Value');
371root_uid=1;
372if SubCampaignTest
373    %TO DO open an exoiting xml doc
374    [t,root_uid]=add(t,1,'element','SubCampaign');
375    t =attributes(t,'add',root_uid,'DirName',Campaign);
376end
377for iexp=1:length(List.Experiment)
378    set(handles.ListExperiments,'Value',iexp+1)
379    drawnow
380    test_mod=0;
381    [t,uid_exp]=add(t,root_uid,'element','Experiment');
382    t = attributes(t,'add',uid_exp,'i',num2str(iexp));
383    ExpName=List.Experiment{iexp}.name;
384    t = attributes(t,'add',uid_exp,'DirName',List.Experiment{iexp}.name);
385   
386    if isfield(List.Experiment{iexp},'Device')
387        for idevice=1:length(List.Experiment{iexp}.Device)
388            [t,uid_device]=add(t,uid_exp,'element','Device');
389            DeviceName=List.Experiment{iexp}.Device{idevice}.name;
390            t = attributes(t,'add',uid_device,'DirName',List.Experiment{iexp}.Device{idevice}.name);       
391            if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile')
392                for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile)
393                    FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml};
394                    [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,[],FileName,SubCampaignTest);
395                    if test
396                        disp([List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} ' , Heading updated'])
397                    end
398                    if isequal(Title,'ImaDoc')
399                        [t,uid_xml]=add(t,uid_device,'element','ImaDoc');
400                        t = attributes(t,'add',uid_xml,'source','file');
401                        [t]=add(t,uid_xml,'chardata',List.Experiment{iexp}.Device{idevice}.xmlfile{ixml});                   
402                    end
403                end
404             elseif isfield(List.Experiment{iexp}.Device{idevice},'Record')
405                for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record)
406                    RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name;
407                    [t,uid_record]=add(t,uid_device,'element','Record');
408                    t = attributes(t,'add',uid_record,'DirName',RecordName);
409                    if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile')
410                        for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile)
411                            FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml};
412                            [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,RecordName,FileName,SubCampaignTest);
413                            if test
414                                disp([FileName ' , Heading updated'])
415                            end
416                            [t,uid_xml]=add(t,uid_record,'element','ImaDoc');
417                            t = attributes(t,'add',uid_xml,'source','file');
418                            [t]=add(t,uid_xml,'chardata',FileName);
419                        end
420                    end
421                end
422            end
423        end
424    end
425end
426set(handles.ListExperiments,'Value',1)
427outputdir=get(handles.SourceDir,'String');
428[path,dirname]=fileparts(outputdir);
429outputfile=fullfile(outputdir,[dirname '.xml']);
430%campaigndoc(t);
431save(t,outputfile)
432
433% %------------------------------------------------------------------------
434% % --- Executes on button press in CampaignDoc.
435% function edit_xml_Callback(hObject, eventdata, handles)
436% %------------------------------------------------------------------------
437% CurrentPath=get(handles.SourceDir,'String');
438% %[CurrentPath,Name,Ext]=fileparts(CurrentDir);
439% ListExperiments=get(handles.ListExperiments,'String');
440% Value=get(handles.ListExperiments,'Value');
441% if ~isequal(Value,1)
442%     ListExperiments=ListExperiments(Value);
443% end
444% ListDevices=get(handles.ListDevices,'String');
445% Value=get(handles.ListDevices,'Value');
446% if ~isequal(Value,1)
447%     ListDevices=ListDevices(Value);
448% end
449% ListRecords=get(handles.ListRecords,'String');
450% Value=get(handles.ListRecords,'Value');
451% if ~isequal(Value,1)
452%     ListRecords=ListRecords(Value);
453% end
454% [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords);
455% ListXml=get(handles.ListXml,'String');
456% Value=get(handles.ListXml,'Value');
457% set(handles.ListXml,'Value',Value(1));
458% if isequal(Value(1),1)
459%     msgbox_uvmat('ERROR','an xml file needs to be selected')
460%    return
461% else
462%     XmlName=ListXml{Value(1)};
463% end
464% for iexp=1:length(List.Experiment)
465%     ExpName=List.Experiment{iexp}.name;
466%     if isfield(List.Experiment{iexp},'Device')
467%         for idevice=1:length(List.Experiment{iexp}.Device)
468%             DeviceName=List.Experiment{iexp}.Device{idevice}.name;
469%             if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile')
470%                 for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile)
471%                     FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml};
472%                     if isequal(FileName,XmlName)
473%                         editxml(fullfile(CurrentPath,ExpName,DeviceName,FileName));
474%                         return
475%                     end
476%                 end
477%              elseif isfield(List.Experiment{iexp}.Device{idevice},'Record')
478%                 for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record)
479%                     RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name;
480%                     if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile')
481%                         for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile)
482%                             FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml};
483%                             if isequal(FileName,XmlName)
484%                                 editxml(fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName));
485%                                 return
486%                             end                         
487%                         end
488%                     end
489%                 end
490%             end
491%         end
492%     end
493% end
494%
495%
496%
497% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
498% % CurrentPath/Campaign: root directory
499% function  [Title,test_mod]=check_heading(Currentpath,Campaign,Experiment,Device,Record,xmlname,testSubCampaign)
500%
501%  %Shema for Heading:
502% %  Campaign             
503% %  (SubCampaign)
504% % Experiment
505% %  Device
506% %  (Record)
507% %  ImageName
508% %  DateExp
509% %                 old: %Project: suppressed ( changed to Campaign)
510%                        %Exp: suppressed (changed to experiment)
511%                        %ImaNames: changed to ImageName
512% if exist('Record','var') && ~isempty(Record)
513%     xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,Record,xmlname); 
514%     testrecord=1;
515% else
516%     xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,xmlname);
517%     testrecord=0;
518% end
519% if ~exist('testSubCampaign','var')
520%     testSubCampaign=0;
521% end
522% if testSubCampaign
523%    SubCampaign=Campaign;
524%    [Currentpath,Campaign,DirExt]=fileparts(Currentpath);
525%    Campaign=[Campaign DirExt];
526% end
527% test_mod=0; %test for the modification of the xml file
528% t_device=xmltree(xmlfullname);
529% Title=get(t_device,1,'name');
530% uid_child=children(t_device,1);
531% Heading_old=[];
532% uidheading=0;
533% for ilist=1:length(uid_child)
534%     name=get(t_device,uid_child(ilist),'name');
535%     if isequal(name,'Heading')
536%         uidheading=uid_child(ilist);
537%     end
538% end
539% if uidheading
540%     subt=branch(t_device,uidheading);
541%     Heading_old=convert(subt);
542% else
543%    return % do not edit xml files without element 'Heading'
544% end
545% if ~(isfield(Heading_old,'Campaign')&& isequal(Heading_old.Campaign,Campaign))
546%     test_mod=1;
547% end
548% Heading.Campaign=Campaign;
549% if testSubCampaign
550%     if ~(isfield(Heading_old,'SubCampaign')&& isequal(Heading_old.SubCampaign,SubCampaign))
551%         test_mod=1;
552%     end
553%     Heading.SubCampaign=SubCampaign;
554% end
555% if ~(isfield(Heading_old,'Experiment')&& isequal(Heading_old.Experiment,Experiment))
556%     test_mod=1;
557% end
558% Heading.Experiment=Experiment;
559% if ~(isfield(Heading_old,'Device')&& isequal(Heading_old.Device,Device))
560%     test_mod=1;
561% end
562% Heading.Device=Device;
563% if testrecord
564%     if ~(isfield(Heading_old,'Record')&& isequal(Heading_old.Record,Record))
565%         test_mod=1;
566%     end
567%     Heading.Record=Record;
568% end
569% if isfield(Heading_old,'ImaNames')
570%     test_mod=1;
571%     if  ~isempty(Heading_old.ImaNames)
572%         Heading.ImageName=Heading_old.ImaNames;
573%     end
574% end
575% if isfield(Heading_old,'ImageName')&& ~isempty(Heading_old.ImageName)
576%     Heading.ImageName=Heading_old.ImageName;
577% end
578% if isfield(Heading_old,'DateExp')&& ~isempty(Heading_old.DateExp)
579%     Heading.DateExp=Heading_old.DateExp;
580% end
581% if test_mod && uidheading
582%      uid_child=children(t_device,uidheading);
583%      t_device=delete(t_device,uid_child);
584%     t_device=struct2xml(Heading,t_device,uidheading);
585%     backupfile=xmlfullname;
586%     testexist=2;
587%     while testexist==2
588%        backupfile=[backupfile '~'];
589%        testexist=exist(backupfile,'file');
590%     end
591%     [success,message]=copyfile(xmlfullname,backupfile);%make backup
592%     if isequal(success,1)
593%         delete(xmlfullname)
594%     else
595%         return
596%     end
597%     save(t_device,xmlfullname)
598% end
599
600%------------------------------------------------------------------------
601% --- Executes on button press in OK.
602%------------------------------------------------------------------------
603function OK_Callback(hObject, eventdata, handles)
604
605if strcmp(get(handles.MirrorDir,'Visible'),'on')
606    Campaign=get(handles.MirrorDir,'String');
607else
608    Campaign=get(handles.SourceDir,'String');
609end
610handles.output.Campaign=Campaign;
611Experiment=get(handles.ListExperiments,'String');
612IndicesExp=get(handles.ListExperiments,'Value');
613if ~isequal(IndicesExp,1)% if first element ('*') selected all the experiments are selected
614    Experiment=Experiment(IndicesExp);% use the selection of the list of experiments
615end
616Experiment=regexprep(Experiment,'^\+/','');% remove the +/ used to mark dir
617Device=get(handles.ListDevices,'String');
618Value=get(handles.ListDevices,'Value');
619Device=Device(Value);
620Device=regexprep(Device,'^\+/','');% remove the +/ used to mark dir
621Device=regexprep(Device,'^~','');% remove the ~ used to mark symbolic link
622handles.output.Experiment=Experiment;
623handles.output.DataSeries=Device;
624guidata(hObject, handles);% Update handles structure
625uiresume(handles.browse_data);
626drawnow
627
628%------------------------------------------------------------------------
629% --- Executes on button press in HELP.
630function HELP_Callback(hObject, eventdata, handles)
631path_to_uvmat=which ('uvmat');% check the path of uvmat
632pathelp=fileparts(path_to_uvmat);
633helpfile=fullfile(pathelp,'UVMAT_DOC','uvmat_doc.html');
634if isempty(dir(helpfile)), msgbox_uvmat('ERROR','Please put the help file uvmat_doc.html in the directory UVMAT/UVMAT_DOC')
635else
636web([helpfile '#dataview'])   
637end
638
639%------------------------------------------------------------------------
640% --- Executes on button press in Cancel.
641%------------------------------------------------------------------------
642function Cancel_Callback(hObject, eventdata, handles)
643   
644handles.output = get(hObject,'String');
645guidata(hObject, handles); % Update handles structure
646% Use UIRESUME instead of delete because the OutputFcn needs
647uiresume(handles.browse_data);
648
649%------------------------------------------------------------------------
650% --- Executes when user attempts to close browse_data.
651%------------------------------------------------------------------------
652function browse_data_CloseRequestFcn(hObject, eventdata, handles)
653if isequal(get(handles.browse_data, 'waitstatus'), 'waiting')
654    % The GUI is still in UIWAIT, us UIRESUME
655    handles.output = get(hObject,'String');
656    guidata(hObject, handles); % Update handles structure
657    uiresume(handles.browse_data);
658else
659    % The GUI is no longer waiting, just close it
660    delete(handles.browse_data);
661end
662
663%------------------------------------------------------------------------
664% --- Executes on key press over figure1 with no controls selected.
665%------------------------------------------------------------------------
666function browse_data_KeyPressFcn(hObject, eventdata, handles)
667   
668% Check for "enter" or "escape"
669if isequal(get(hObject,'CurrentKey'),'escape')
670    % User said no by hitting escape
671    handles.output = 'Cancel';
672   
673    % Update handles structure
674    guidata(hObject, handles);
675   
676    uiresume(handles.browse_data);
677end
678if isequal(get(hObject,'CurrentKey'),'return')
679    uiresume(handles.browse_data);
680end
681
682
683% --- Executes on button press in Browse.
684function Browse_Callback(hObject, eventdata, handles)
685ListDevices=get(handles.ListDevices,'String');
686Device=ListDevices{get(handles.ListDevices,'Value')};
687DataSeries=uigetfile_uvmat('open a data folder',Device,'uigetdir');
688uiresume(handles.browse_data);
689browse_data(DataSeries)
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