source: trunk/src/check_files.m @ 306

Last change on this file since 306 was 306, checked in by gostiaux, 9 years ago

bug if you do not launch uvmat from the uvmat dir corrected

File size: 8.5 KB
Line 
1%'check_files': check the path, modification date and svn version for all the
2%  function in the toolbox UVMAT. Called at the opening of uvmat. Adds the
3%  uvmat path to the Matlab path if needed.
4%----------------------------------------------------------------------
5% function [errormsg,date_str,ver]=check_files
6%
7% OUTPUT:
8% errormsg: error message listing functions whose paths are not in the directory of uvmat.m
9% date_str: date of the most recent modification of a file in the toolbox
10% ver : svn version in case this is a  svn repository
11
12%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
13%  Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org.
14%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
15%     This file is part of the toolbox UVMAT.
16%
17%     UVMAT is free software; you can redistribute it and/or modify
18%     it under the terms of the GNU General Public License as published by
19%     the Free Software Foundation; either version 2 of the License, or
20%     (at your option) any later version.
21%
22%     UVMAT is distributed in the hope that it will be useful,
23%     but WITHOUT ANY WARRANTY; without even the implied warranty of
24%     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
25%     GNU General Public License (file UVMAT/COPYING.txt) for more details.
26%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
27
28function [errormsg,date_str,svn_info]=check_files
29errormsg={};%default
30date_str='';
31svn_info.rep_rev=[];
32svn_info.cur_rev=[];
33svn_info.status=[];
34list_fct={...
35    'calc_field';...% defines fields (velocity, vort, div...) from civx data and calculate them
36    'cell2tab';... %transform a Matlab cell in a character array suitable for display in a table
37    'check_field_structure';...% check the validity of the field struture representation consistant with the netcdf format
38    'check_files';...
39    'civ';...   %function associated with the interface 'civ.fig' for PIV and spline interpolation
40    'civ.fig';...
41    'civ_3D';... function associated with the interface 'civ_3D.fig' for PIV in volume (in progress)
42    'civ_3D.fig';...
43    'civ_uvmat';...% civ programs, Matlab version (called by civ.m, option Civuvmat)
44    'close_fig';...% function  activated when a figure is closed
45    'copyfields';...% copy fields between two matlab structures
46    'create_grid';...% called by the GUI geometry_calib to create a physical grid
47    'create_grid.fig';...% GUI corresponding to create_grid.m
48    'dataview';...% function for scanning directories in a campaign
49    'dataview.fig';...% GUI corresponding to dataview
50    'delete_object';...%delete a projection object, defined by its index in the Uvmat list or by its graphic handle
51    'editxml';...%display and edit xml files using a xls schema
52    'editxml.fig';...%interface for editxml
53    'find_field_indices';...% group the variables of a nc-formated Matlab structure into 'fields' with common dimensions
54    'geometry_calib';...%performs geometric calibration from a set of reference points
55    'geometry_calib.fig';...%interface for geometry_calib
56    'get_field';...% choose and plot a field from a Netcdf file
57    'get_field.fig';...%interface for get_field
58    'griddata_uvmat';...%make 2D linear interpolation using griddata, with input appropriate for both Matlab 6.5 and 7
59    'hist_update';...%  update of a current global histogram by inclusion of a new field
60    'imadoc2struct';...%convert the image documentation file ImaDoc into a Matlab structure
61    'keyboard_callback';... % function activated when a key is pressed on the keyboard
62    'ListDir';... scan the structure of the directory tree (for dataview.m)
63    'mouse_down';% function activated when the mouse button is pressed on a figure (callback for 'WindowButtonDownFcn')
64    'mouse_motion';...% permanently called by mouse motion over a figure (callback for 'WindowButtonMotionFcn')
65    'mouse_up';... % function to be activated when the mouse button is released (callback for 'WindowButtonUpFcn')
66    'msgbox_uvmat';... associated with GUI msgbox_uvmat.fig to display message boxes, for error, warning or input calls
67    'msgbox_uvmat.fig';...
68    'name2display';...% extracts the root name and field numbers from an input filename
69    'name_generator';...%creates a file name from a root name and indices.
70    'nc2struct';...% transform a netcdf file in a corresponding matlab structure
71    'peaklock';...%
72    'phys_XYZ';...% transform coordiantes from pixels to phys
73    'pivlab';...% PIV program (Civ1), called by civ_uvmat
74    'px_XYZ';...% transform coordiantes from phys to pixels
75    'plot_field';...%displays a vector field and/or scalar or images
76    'plot_object';...%draws a projection object (points, line, plane...)
77    'proj_field';...%project a field on a projection object (plane, line,...)
78    'read_civxdata';...reads civx data from netcdf files
79    'read_imatext';...%read .civ files (obsolete, but can be adapted to other text documentation files)
80    'read_GUI';... %read all parameters set by a GUI as a Matlab structure
81    'read_set_object';...%read the data on the set_object interface
82    'read_xls';...%read excel files containing the list of the experiments
83    'reinit';...% suppress the personal parameter file 'uvmat_perso.mat'
84    'RUN_STLIN';...% combine 2 displacement fields for stereo PIV
85    'series';...% master function for analysis field series, with interface 'series.fig'
86    'series.fig';...% interface for 'series'
87    'set_col_vec';...
88    'set_grid';...% creates a grid for PIV
89    'set_grid.fig';...% interface for set_grid
90    'set_object.m';...%  edit a projection object
91    'set_object.fig';...% interface for set_object
92    'sub_field';...% combine the two input fields,
93    'struct2nc';...% %write fields in netcdf files
94    'uvmat';...% master function for file scanning and visualisation of 2D fields
95    'uvmat.fig';...  %interface for uvmat
96    'update_imadoc';...  %update the ImaDoc xml file
97    'update_obj';... update the object representation graph and its projection field, record it in the uvmat interface
98    'update_waitbar';... update the waitbar display, used for ACTION functions in the GUI 'series'
99    'view_field.m';...% function for visualisation of projected fields'
100    'view_field.fig';...%GUI for view_field
101    'write_plot_param'...%update plotting parameters after plot
102    };
103dir_fct=which('uvmat');% path to uvmat
104[pathuvmat,name,ext]=fileparts(dir_fct);
105
106%% add the uvmat path to matlab if needed
107if isempty(regexp(path,[pathuvmat '(:|\>)'],'once'))
108    addpath(pathuvmat);
109end
110
111
112%% loop on the list of functions in the uvmat package
113
114icount=0;
115datnum=zeros(1,length(list_fct));
116for i=1:length(list_fct)
117    dir_fct=which(list_fct{i});% path to fct
118    if isempty(dir_fct)
119        icount=icount+1;
120        errormsg{icount}=[list_fct{i} ' not found'];% test for function not found
121    else
122        [pth,name,ext]=fileparts(dir_fct);
123        if ~isequal(pathuvmat,pth)&~isequal(fullfile(pathuvmat,'private'),pth)
124            icount=icount+1;
125            errormsg{icount}=[dir_fct ' overrides the package UVMAT'];% bad path for the function
126        end
127        datfile=dir(dir_fct);
128        if isfield(datfile,'datenum')
129            datnum(i)= datfile.datenum;
130        end
131        %        date_str=datfile.date;%string of the date of last modification
132        %        datnum(i)=0;%default
133        %        try
134        %            datnum(i)=datenum(date_str);
135        %        catch
136        %            datnum(i)=0;%in case of error with datenum (e.g. date in french)
137        %        end
138    end
139end
140date_str=datestr(max(datnum));
141
142[status,~]=system('svn --help');
143if status==0
144    [~,result]=system(['svn info ' dir_fct]);
145    t=regexp(result,'R.vision\s:\s(?<rev>\d+)','names');
146    svn_info.cur_rev=str2double(t.rev);
147    [~,result]=system(['svn info -r ''HEAD'' '  dir_fct]);
148    t=regexp(result,'R.vision\s:\s(?<rev>\d+)','names');
149    svn_info.rep_rev=str2double(t.rev);
150    [~,result]=system(['svn status'  dir_fct]);   
151    svn_info.status=result;
152    if svn_info.rep_rev>svn_info.cur_rev
153        errormsg {length(errormsg)+1}=['Repository now at revision ' num2str(svn_info.rep_rev) '. Please type svn update in uvmat folder'];
154    end
155   
156    modifications=regexp(svn_info.status,'M\s[^(\n|\>)]+','match');
157   
158    if ~isempty(modifications)
159        for k=1:length(modifications)
160            errormsg {length(errormsg)+1}=modifications{k};
161        end
162    end
163end
164errormsg=errormsg';
165
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