source: trunk/src/check_files.m @ 330

Last change on this file since 330 was 315, checked in by sommeria, 13 years ago

many corrections, use of the new GUI civ with mask, grid and the new matlab civ1 and fix
pivlab now included in civ_matlab which contains all matlab subfunctions for civ.

File size: 8.5 KB
1%'check_files': check the path, modification date and svn version for all the
2%  function in the toolbox UVMAT. Called at the opening of uvmat. Adds the
3%  uvmat path to the Matlab path if needed.
5% function [errormsg,date_str,ver]=check_files
8% errormsg: error message listing functions whose paths are not in the directory of uvmat.m
9% date_str: date of the most recent modification of a file in the toolbox
10% ver : svn version in case this is a  svn repository
13%  Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG,
15%     This file is part of the toolbox UVMAT.
17%     UVMAT is free software; you can redistribute it and/or modify
18%     it under the terms of the GNU General Public License as published by
19%     the Free Software Foundation; either version 2 of the License, or
20%     (at your option) any later version.
22%     UVMAT is distributed in the hope that it will be useful,
23%     but WITHOUT ANY WARRANTY; without even the implied warranty of
25%     GNU General Public License (file UVMAT/COPYING.txt) for more details.
28function [errormsg,date_str,svn_info]=check_files
35    'calc_field';...% defines fields (velocity, vort, div...) from civx data and calculate them
36    'cell2tab';... %transform a Matlab cell in a character array suitable for display in a table
37    'check_field_structure';...% check the validity of the field struture representation consistant with the netcdf format
38    'check_files';...
39    'civ';...   %function associated with the interface 'civ.fig' for PIV and spline interpolation
40    'civ.fig';...
41    'civ_3D';... function associated with the interface 'civ_3D.fig' for PIV in volume (in progress)
42    'civ_3D.fig';...
43    'civ_matlab';...% civ programs, Matlab version (called by civ.m, option Civprogram/Matlab in the upper menu bar)
44    'close_fig';...% function  activated when a figure is closed
45    'copyfields';...% copy fields between two matlab structures
46    'create_grid';...% called by the GUI geometry_calib to create a physical grid
47    'create_grid.fig';...% GUI corresponding to create_grid.m
48    'dataview';...% function for scanning directories in a campaign
49    'dataview.fig';...% GUI corresponding to dataview
50    'delete_object';...%delete a projection object, defined by its index in the Uvmat list or by its graphic handle
51    'editxml';...%display and edit xml files using a xls schema
52    'editxml.fig';...%interface for editxml
53    'find_field_indices';...% group the variables of a nc-formated Matlab structure into 'fields' with common dimensions
54    'geometry_calib';...%performs geometric calibration from a set of reference points
55    'geometry_calib.fig';...%interface for geometry_calib
56    'get_field';...% choose and plot a field from a Netcdf file
57    'get_field.fig';...%interface for get_field
58    'griddata_uvmat';...%make 2D linear interpolation using griddata, with input appropriate for both Matlab 6.5 and 7
59    'hist_update';...%  update of a current global histogram by inclusion of a new field
60    'imadoc2struct';...%convert the image documentation file ImaDoc into a Matlab structure
61    'keyboard_callback';... % function activated when a key is pressed on the keyboard
62    'ListDir';... scan the structure of the directory tree (for dataview.m)
63    'mouse_down';% function activated when the mouse button is pressed on a figure (callback for 'WindowButtonDownFcn')
64    'mouse_motion';...% permanently called by mouse motion over a figure (callback for 'WindowButtonMotionFcn')
65    'mouse_up';... % function to be activated when the mouse button is released (callback for 'WindowButtonUpFcn')
66    'msgbox_uvmat';... associated with GUI msgbox_uvmat.fig to display message boxes, for error, warning or input calls
67    'msgbox_uvmat.fig';...
68    'name2display';...% extracts the root name and field numbers from an input filename
69    'name_generator';...%creates a file name from a root name and indices.
70    'nc2struct';...% transform a netcdf file in a corresponding matlab structure
71    'peaklock';...%
72    'phys_XYZ';...% transform coordiantes from pixels to phys
73    'px_XYZ';...% transform coordiantes from phys to pixels
74    'plot_field';...%displays a vector field and/or scalar or images
75    'plot_object';...%draws a projection object (points, line, plane...)
76    'proj_field';...%project a field on a projection object (plane, line,...)
77    'read_civxdata';...reads civx data from netcdf files
78    'read_imatext';...%read .civ files (obsolete, but can be adapted to other text documentation files)
79    'read_GUI';... %read all parameters set by a GUI as a Matlab structure
80    'read_set_object';...%read the data on the set_object interface
81    'read_xls';...%read excel files containing the list of the experiments
82    'reinit';...% suppress the personal parameter file 'uvmat_perso.mat'
83    'RUN_STLIN';...% combine 2 displacement fields for stereo PIV
84    'series';...% master function for analysis field series, with interface 'series.fig'
85    'series.fig';...% interface for 'series'
86    'set_col_vec';...
87    'set_grid';...% creates a grid for PIV
88    'set_grid.fig';...% interface for set_grid
89    'set_object.m';...%  edit a projection object
90    'set_object.fig';...% interface for set_object
91    'sub_field';...% combine the two input fields,
92    'struct2nc';...% %write fields in netcdf files
93    'uvmat';...% master function for file scanning and visualisation of 2D fields
94    'uvmat.fig';...  %interface for uvmat
95    'update_imadoc';...  %update the ImaDoc xml file
96    'update_obj';... update the object representation graph and its projection field, record it in the uvmat interface
97    'update_waitbar';... update the waitbar display, used for ACTION functions in the GUI 'series'
98    'view_field.m';...% function for visualisation of projected fields'
99    'view_field.fig';...%GUI for view_field
100    'write_plot_param'...%update plotting parameters after plot
101    };
102dir_fct=which('uvmat');% path to uvmat
105%% add the uvmat path to matlab if needed
106if isempty(regexp(path,[pathuvmat '(:|\>)'],'once'))
107    addpath(pathuvmat);
111%% loop on the list of functions in the uvmat package
115for i=1:length(list_fct)
116    dir_fct=which(list_fct{i});% path to fct
117    if isempty(dir_fct)
118        icount=icount+1;
119        errormsg{icount}=[list_fct{i} ' not found'];% test for function not found
120    else
121        [pth,name,ext]=fileparts(dir_fct);
122        if ~isequal(pathuvmat,pth)&~isequal(fullfile(pathuvmat,'private'),pth)
123            icount=icount+1;
124            errormsg{icount}=[dir_fct ' overrides the package UVMAT'];% bad path for the function
125        end
126        datfile=dir(dir_fct);
127        if isfield(datfile,'datenum')
128            datnum(i)= datfile.datenum;
129        end
130        %;%string of the date of last modification
131        %        datnum(i)=0;%default
132        %        try
133        %            datnum(i)=datenum(date_str);
134        %        catch
135        %            datnum(i)=0;%in case of error with datenum (e.g. date in french)
136        %        end
137    end
141[status,~]=system('svn --help');
142if status==0
143    [~,result]=system(['svn info ' dir_fct]);
144    t=regexp(result,'\s:\s(?<rev>\d+)','names');
145    svn_info.cur_rev=str2double(t.rev);
146    [~,result]=system(['svn info -r ''HEAD'' '  dir_fct]);
147    t=regexp(result,'\s:\s(?<rev>\d+)','names');
148    svn_info.rep_rev=str2double(t.rev);
149    [~,result]=system(['svn status'  dir_fct]);   
150    svn_info.status=result;
151    if svn_info.rep_rev>svn_info.cur_rev
152        errormsg {length(errormsg)+1}=['Repository now at revision ' num2str(svn_info.rep_rev) '. Please type svn update in uvmat folder'];
153    end
155    modifications=regexp(svn_info.status,'M\s[^(\n|\>)]+','match');
157    if ~isempty(modifications)
158        for k=1:length(modifications)
159            errormsg {length(errormsg)+1}=modifications{k};
160        end
161    end
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