%'check_files': check the path, modification date and svn version for all the % function in the toolbox UVMAT. Called at the opening of uvmat. Adds the % uvmat path to the Matlab path if needed. %---------------------------------------------------------------------- % function [errormsg,date_str,ver]=check_files % % OUTPUT: % errormsg: error message listing functions whose paths are not in the directory of uvmat.m % date_str: date of the most recent modification of a file in the toolbox % ver : svn version in case this is a svn repository %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % This file is part of the toolbox UVMAT. % % UVMAT is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published by % the Free Software Foundation; either version 2 of the License, or % (at your option) any later version. % % UVMAT is distributed in the hope that it will be useful, % but WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License (file UVMAT/COPYING.txt) for more details. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA function [errormsg,date_str,svn_info]=check_files errormsg={};%default date_str=''; svn_info.rep_rev=[]; svn_info.cur_rev=[]; svn_info.status=[]; list_fct={... 'calc_field';...% defines fields (velocity, vort, div...) from civx data and calculate them 'cell2tab';... %transform a Matlab cell in a character array suitable for display in a table 'check_field_structure';...% check the validity of the field struture representation consistant with the netcdf format 'check_files';... 'civ';... %function associated with the interface 'civ.fig' for PIV and spline interpolation 'civ.fig';... 'civ_3D';... function associated with the interface 'civ_3D.fig' for PIV in volume (in progress) 'civ_3D.fig';... 'civ_matlab';...% civ programs, Matlab version (called by civ.m, option Civprogram/Matlab in the upper menu bar) 'close_fig';...% function activated when a figure is closed 'copyfields';...% copy fields between two matlab structures 'create_grid';...% called by the GUI geometry_calib to create a physical grid 'create_grid.fig';...% GUI corresponding to create_grid.m 'dataview';...% function for scanning directories in a campaign 'dataview.fig';...% GUI corresponding to dataview 'delete_object';...%delete a projection object, defined by its index in the Uvmat list or by its graphic handle 'editxml';...%display and edit xml files using a xls schema 'editxml.fig';...%interface for editxml 'fileparts_uvmat';...% extracts the root name,field indexes and nomenclature type from an input filename 'find_field_indices';...% group the variables of a nc-formated Matlab structure into 'fields' with common dimensions 'geometry_calib';...%performs geometric calibration from a set of reference points 'geometry_calib.fig';...%interface for geometry_calib 'get_field';...% choose and plot a field from a Netcdf file 'get_field.fig';...%interface for get_field 'griddata_uvmat';...%make 2D linear interpolation using griddata, with input appropriate for both Matlab 6.5 and 7 'hist_update';...% update of a current global histogram by inclusion of a new field 'imadoc2struct';...%convert the image documentation file ImaDoc into a Matlab structure 'keyboard_callback';... % function activated when a key is pressed on the keyboard 'ListDir';... scan the structure of the directory tree (for dataview.m) 'mouse_down';% function activated when the mouse button is pressed on a figure (callback for 'WindowButtonDownFcn') 'mouse_motion';...% permanently called by mouse motion over a figure (callback for 'WindowButtonMotionFcn') 'mouse_up';... % function to be activated when the mouse button is released (callback for 'WindowButtonUpFcn') 'msgbox_uvmat';... associated with GUI msgbox_uvmat.fig to display message boxes, for error, warning or input calls 'msgbox_uvmat.fig';... 'name_generator';...%creates a file name from a root name and indices. 'nc2struct';...% transform a netcdf file in a corresponding matlab structure 'peaklock';...% 'phys_XYZ';...% transform coordiantes from pixels to phys 'px_XYZ';...% transform coordiantes from phys to pixels 'plot_field';...%displays a vector field and/or scalar or images 'plot_object';...%draws a projection object (points, line, plane...) 'proj_field';...%project a field on a projection object (plane, line,...) 'read_civxdata';...reads civx data from netcdf files 'read_imatext';...%read .civ files (obsolete, but can be adapted to other text documentation files) 'read_GUI';... %read all parameters set by a GUI as a Matlab structure 'read_set_object';...%read the data on the set_object interface 'read_xls';...%read excel files containing the list of the experiments 'reinit';...% suppress the personal parameter file 'uvmat_perso.mat' 'RUN_STLIN';...% combine 2 displacement fields for stereo PIV 'series';...% master function for analysis field series, with interface 'series.fig' 'series.fig';...% interface for 'series' 'set_col_vec';... 'set_grid';...% creates a grid for PIV 'set_grid.fig';...% interface for set_grid 'set_object.m';...% edit a projection object 'set_object.fig';...% interface for set_object 'sub_field';...% combine the two input fields, 'struct2nc';...% %write fields in netcdf files 'uvmat';...% master function for file scanning and visualisation of 2D fields 'uvmat.fig';... %interface for uvmat 'update_imadoc';... %update the ImaDoc xml file 'update_obj';... update the object representation graph and its projection field, record it in the uvmat interface 'update_waitbar';... update the waitbar display, used for ACTION functions in the GUI 'series' 'view_field.m';...% function for visualisation of projected fields' 'view_field.fig';...%GUI for view_field 'write_plot_param'...%update plotting parameters after plot }; dir_fct=which('uvmat');% path to uvmat [pathuvmat,name,ext]=fileparts(dir_fct); %% add the uvmat path to matlab if needed if isempty(regexp(path,[pathuvmat '(:|\>)'],'once')) addpath(pathuvmat); end %% loop on the list of functions in the uvmat package icount=0; datnum=zeros(1,length(list_fct)); for i=1:length(list_fct) dir_fct=which(list_fct{i});% path to fct if isempty(dir_fct) icount=icount+1; errormsg{icount}=[list_fct{i} ' not found'];% test for function not found else [pth,name,ext]=fileparts(dir_fct); if ~isequal(pathuvmat,pth)&~isequal(fullfile(pathuvmat,'private'),pth) icount=icount+1; errormsg{icount}=[dir_fct ' overrides the package UVMAT'];% bad path for the function end datfile=dir(dir_fct); if isfield(datfile,'datenum') datnum(i)= datfile.datenum; end % date_str=datfile.date;%string of the date of last modification % datnum(i)=0;%default % try % datnum(i)=datenum(date_str); % catch % datnum(i)=0;%in case of error with datenum (e.g. date in french) % end end end date_str=datestr(max(datnum)); try [status]=system('svn --help'); if status==0 [tild,result]=system(['svn info ' dir_fct]); t=regexp(result,'R.vision\s:\s(?\d+)','names'); svn_info.cur_rev=str2double(t.rev); [tild,result]=system(['svn info -r ''HEAD'' ' dir_fct]); t=regexp(result,'R.vision\s:\s(?\d+)','names'); svn_info.rep_rev=str2double(t.rev); [tild,result]=system(['svn status' dir_fct]); svn_info.status=result; if svn_info.rep_rev>svn_info.cur_rev errormsg {length(errormsg)+1}=['Repository now at revision ' num2str(svn_info.rep_rev) '. Please type svn update in uvmat folder']; end modifications=regexp(svn_info.status,'M\s[^(\n|\>)]+','match'); if ~isempty(modifications) for k=1:length(modifications) errormsg {length(errormsg)+1}=modifications{k}; end end end end errormsg=errormsg';