[8] | 1 | %'check_functions': check the path and modification date for all the
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[89] | 2 | % function in the toolbox UVMAT. Called at the opening of uvmat
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[8] | 3 | %----------------------------------------------------------------------
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| 4 | % function [errormsg,date_str]=check_functions
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| 5 | %
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| 6 | % OUTPUT:
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| 7 | % errormsg: error message listing functions whose paths are not in the directory of uvmat.m
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| 8 | % date_str: date of the most recent modification of a file in the toolbox
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[89] | 9 |
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[8] | 10 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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| 11 | % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org.
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| 12 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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| 13 | % This file is part of the toolbox UVMAT.
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| 14 | %
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| 15 | % UVMAT is free software; you can redistribute it and/or modify
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| 16 | % it under the terms of the GNU General Public License as published by
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| 17 | % the Free Software Foundation; either version 2 of the License, or
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| 18 | % (at your option) any later version.
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| 19 | %
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| 20 | % UVMAT is distributed in the hope that it will be useful,
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| 21 | % but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 22 | % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 23 | % GNU General Public License (file UVMAT/COPYING.txt) for more details.
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| 24 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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| 25 |
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| 26 | function [errormsg,date_str]=check_functions
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| 27 | errormsg={};%default
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| 28 | list_fct={'calc_field';...% defines fields (velocity, vort, div...) from civx data and calculate them
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| 29 | 'cell2tab';... %transform a Matlab cell in a character array suitable for display in a table
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[38] | 30 | 'check_field_structure';...% check the validity of the field struture representation consistant with the netcdf format
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[8] | 31 | 'check_functions';...
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| 32 | 'civ';... %function associated with the interface 'civ.fig' for PIV and spline interpolation
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| 33 | 'civ.fig';...
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| 34 | 'civ_3D';... function associated with the interface 'civ_3D.fig' for PIV in volume (in progress)
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| 35 | 'civ_3D.fig';...
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| 36 | 'close_fig';...% function activated when a figure is closed
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[38] | 37 | 'copyfields';...% copy fields between two matlab structures
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| 38 | 'create_grid';...% called by the GUI geometry_calib to create a physical grid
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| 39 | 'create_grid.fig';...% GUI corresponding to create_grid.m
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| 40 | 'dataview';...% function for scanning directories in a campaign
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| 41 | 'delete_object';...%delete a projection object, defined by its index in the Uvmat list or by its graphic handle
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[8] | 42 | 'editxml';...%display and edit xml files using a xls schema
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| 43 | 'editxml.fig';...%interface for editxml
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| 44 | 'find_field_indices';...% group the variables of a nc-formated Matlab structure into 'fields' with common dimensions
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| 45 | 'geometry_calib';...%performs geometric calibration from a set of reference points
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| 46 | 'geometry_calib.fig';...%interface for geometry_calib
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| 47 | 'get_field';...% choose and plot a field from a Netcdf file
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| 48 | 'get_field.fig';...%interface for get_field
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| 49 | 'get_plot_handles';... %provides handles of elements setting the plotting parameters in the uvmat interface
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| 50 | 'griddata_uvmat';...%make 2D linear interpolation using griddata, with input appropriate for both Matlab 6.5 and 7
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| 51 | 'hist_update';...% update of a current global histogram by inclusion of a new field
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| 52 | 'imadoc2struct';...%convert the image documentation file ImaDoc into a Matlab structure
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| 53 | 'keyboard_callback';... % function activated when a key is pressed on the keyboard
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| 54 | 'ListDir';... scan the structure of the directory tree (for dataview.m)
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| 55 | 'mouse_down';% function activated when the mouse button is pressed on a figure (callback for 'WindowButtonDownFcn')
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| 56 | 'mouse_motion';...% permanently called by mouse motion over a figure (callback for 'WindowButtonMotionFcn')
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| 57 | 'mouse_up';... % function to be activated when the mouse button is released (callback for 'WindowButtonUpFcn')
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| 58 | 'msgbox_uvmat';... associated with GUI msgbox_uvmat.fig to display message boxes, for error, warning or input calls
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| 59 | 'msgbox_uvmat.fig';...
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| 60 | 'name2display';...% extracts the root name and field numbers from an input filename
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| 61 | 'name_generator';...%creates a file name from a root name and indices.
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| 62 | 'nc2struct';...% transform a netcdf file in a corresponding matlab structure
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| 63 | 'peaklock';...%
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| 64 | 'plot_field';...%displays a vector field and/or scalar or images
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| 65 | 'plot_object';...%draws a projection object (points, line, plane...)
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| 66 | 'proj_field';...%project a field on a projection object (plane, line,...)
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| 67 | 'read_civxdata';...reads civx data from netcdf files
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| 68 | 'read_imatext';...%read .civ files (obsolete, but can be adapted to other text documentation files)
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| 69 | 'read_plot_param';... %read the plotting option parameters on the uvmat interface
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| 70 | 'read_set_object';...%read the data on the set_object interface
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| 71 | 'read_xls';...%read excel files containing the list of the experiments
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| 72 | 'reinit';...% suppress the personal parameter file 'uvmat_perso.mat'
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| 73 | 'RUN_FIX';...% fix velocity fields
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| 74 | 'RUN_STLIN';...% combine 2 displacement fields for stereo PIV
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| 75 | 'series';...% master function for analysis field series, with interface 'series.fig'
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| 76 | 'series.fig';...% interface for 'series'
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| 77 | 'set_col_vec';...
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| 78 | 'set_grid';...% creates a grid for PIV
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| 79 | 'set_grid.fig';...% interface for set_grid
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| 80 | 'set_object.m';...% edit a projection object
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| 81 | 'set_object.fig';...% interface for set_object
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| 82 | 'sub_field';...% combine the two input fields,
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| 83 | 'struct2nc';...% %write fields in netcdf files
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| 84 | 'uvmat';...% master function for file scanning and visualisation of 2D fields
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| 85 | 'uvmat.fig';... %interface for uvmat
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[14] | 86 | 'update_imadoc';... %update the ImaDoc xml file
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[8] | 87 | 'update_obj';... update the object representation graph and its projection field, record it in the uvmat interface
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| 88 | 'update_waitbar';... update the waitbar display, used for ACTION functions in the GUI 'series'
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| 89 | 'write_plot_param'};%update plotting parameters after plot
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| 90 | dir_fct=which('uvmat');% path to uvmat
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| 91 | [pathuvmat,name,ext]=fileparts(dir_fct);
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| 92 | icount=0;
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| 93 | % loop on the list of functions in the uvmat package
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| 94 | for i=1:length(list_fct)
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| 95 | dir_fct=which(list_fct{i});% path to fct
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| 96 | if isempty(dir_fct)
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| 97 | icount=icount+1;
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| 98 | errormsg{icount}=[list_fct{i} ' not found'];% test for function not found
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| 99 | else
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| 100 | [pth,name,ext]=fileparts(dir_fct);
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[9] | 101 | if ~isequal(pathuvmat,pth)&~isequal(fullfile(pathuvmat,'private'),pth)
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[8] | 102 | icount=icount+1;
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| 103 | errormsg{icount}=[dir_fct ' overrides the package UVMAT'];% bad path for the function
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| 104 | end
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| 105 | datfile=dir(dir_fct);
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| 106 | date_str=datfile.date;%string of the date of last modification
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| 107 | datnum(i)=0;%default
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[42] | 108 | try
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| 109 | datnum(i)=datenum(date_str);
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| 110 | catch
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| 111 | datnum(i)=0;%in case of error with datenum (e.g. date in french)
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[8] | 112 | end
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| 113 | end
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| 114 | end
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| 115 | errormsg=errormsg';
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| 116 | date_str=datestr(max(datnum));
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