1 | %'check_functions': check the path and modification date for all the
|
---|
2 | % function in the toolbox UVMAT. Called at the opening of uvmat
|
---|
3 | %----------------------------------------------------------------------
|
---|
4 | % function [errormsg,date_str]=check_functions
|
---|
5 | %
|
---|
6 | % OUTPUT:
|
---|
7 | % errormsg: error message listing functions whose paths are not in the directory of uvmat.m
|
---|
8 | % date_str: date of the most recent modification of a file in the toolbox
|
---|
9 |
|
---|
10 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
---|
11 | % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org.
|
---|
12 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
---|
13 | % This file is part of the toolbox UVMAT.
|
---|
14 | %
|
---|
15 | % UVMAT is free software; you can redistribute it and/or modify
|
---|
16 | % it under the terms of the GNU General Public License as published by
|
---|
17 | % the Free Software Foundation; either version 2 of the License, or
|
---|
18 | % (at your option) any later version.
|
---|
19 | %
|
---|
20 | % UVMAT is distributed in the hope that it will be useful,
|
---|
21 | % but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
22 | % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
23 | % GNU General Public License (file UVMAT/COPYING.txt) for more details.
|
---|
24 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
---|
25 |
|
---|
26 | function [errormsg,date_str]=check_functions
|
---|
27 | errormsg={};%default
|
---|
28 | list_fct={'calc_field';...% defines fields (velocity, vort, div...) from civx data and calculate them
|
---|
29 | 'cell2tab';... %transform a Matlab cell in a character array suitable for display in a table
|
---|
30 | 'check_field_structure';...% check the validity of the field struture representation consistant with the netcdf format
|
---|
31 | 'check_functions';...
|
---|
32 | 'civ';... %function associated with the interface 'civ.fig' for PIV and spline interpolation
|
---|
33 | 'civ.fig';...
|
---|
34 | 'civ_3D';... function associated with the interface 'civ_3D.fig' for PIV in volume (in progress)
|
---|
35 | 'civ_3D.fig';...
|
---|
36 | 'close_fig';...% function activated when a figure is closed
|
---|
37 | 'copyfields';...% copy fields between two matlab structures
|
---|
38 | 'create_grid';...% called by the GUI geometry_calib to create a physical grid
|
---|
39 | 'create_grid.fig';...% GUI corresponding to create_grid.m
|
---|
40 | 'dataview';...% function for scanning directories in a campaign
|
---|
41 | 'delete_object';...%delete a projection object, defined by its index in the Uvmat list or by its graphic handle
|
---|
42 | 'editxml';...%display and edit xml files using a xls schema
|
---|
43 | 'editxml.fig';...%interface for editxml
|
---|
44 | 'find_field_indices';...% group the variables of a nc-formated Matlab structure into 'fields' with common dimensions
|
---|
45 | 'geometry_calib';...%performs geometric calibration from a set of reference points
|
---|
46 | 'geometry_calib.fig';...%interface for geometry_calib
|
---|
47 | 'get_field';...% choose and plot a field from a Netcdf file
|
---|
48 | 'get_field.fig';...%interface for get_field
|
---|
49 | 'get_plot_handles';... %provides handles of elements setting the plotting parameters in the uvmat interface
|
---|
50 | 'griddata_uvmat';...%make 2D linear interpolation using griddata, with input appropriate for both Matlab 6.5 and 7
|
---|
51 | 'hist_update';...% update of a current global histogram by inclusion of a new field
|
---|
52 | 'imadoc2struct';...%convert the image documentation file ImaDoc into a Matlab structure
|
---|
53 | 'keyboard_callback';... % function activated when a key is pressed on the keyboard
|
---|
54 | 'ListDir';... scan the structure of the directory tree (for dataview.m)
|
---|
55 | 'mouse_down';% function activated when the mouse button is pressed on a figure (callback for 'WindowButtonDownFcn')
|
---|
56 | 'mouse_motion';...% permanently called by mouse motion over a figure (callback for 'WindowButtonMotionFcn')
|
---|
57 | 'mouse_up';... % function to be activated when the mouse button is released (callback for 'WindowButtonUpFcn')
|
---|
58 | 'msgbox_uvmat';... associated with GUI msgbox_uvmat.fig to display message boxes, for error, warning or input calls
|
---|
59 | 'msgbox_uvmat.fig';...
|
---|
60 | 'name2display';...% extracts the root name and field numbers from an input filename
|
---|
61 | 'name_generator';...%creates a file name from a root name and indices.
|
---|
62 | 'nc2struct';...% transform a netcdf file in a corresponding matlab structure
|
---|
63 | 'peaklock';...%
|
---|
64 | 'plot_field';...%displays a vector field and/or scalar or images
|
---|
65 | 'plot_object';...%draws a projection object (points, line, plane...)
|
---|
66 | 'proj_field';...%project a field on a projection object (plane, line,...)
|
---|
67 | 'read_civxdata';...reads civx data from netcdf files
|
---|
68 | 'read_imatext';...%read .civ files (obsolete, but can be adapted to other text documentation files)
|
---|
69 | 'read_plot_param';... %read the plotting option parameters on the uvmat interface
|
---|
70 | 'read_set_object';...%read the data on the set_object interface
|
---|
71 | 'read_xls';...%read excel files containing the list of the experiments
|
---|
72 | 'reinit';...% suppress the personal parameter file 'uvmat_perso.mat'
|
---|
73 | 'RUN_FIX';...% fix velocity fields
|
---|
74 | 'RUN_STLIN';...% combine 2 displacement fields for stereo PIV
|
---|
75 | 'series';...% master function for analysis field series, with interface 'series.fig'
|
---|
76 | 'series.fig';...% interface for 'series'
|
---|
77 | 'set_col_vec';...
|
---|
78 | 'set_grid';...% creates a grid for PIV
|
---|
79 | 'set_grid.fig';...% interface for set_grid
|
---|
80 | 'set_object.m';...% edit a projection object
|
---|
81 | 'set_object.fig';...% interface for set_object
|
---|
82 | 'sub_field';...% combine the two input fields,
|
---|
83 | 'struct2nc';...% %write fields in netcdf files
|
---|
84 | 'uvmat';...% master function for file scanning and visualisation of 2D fields
|
---|
85 | 'uvmat.fig';... %interface for uvmat
|
---|
86 | 'update_imadoc';... %update the ImaDoc xml file
|
---|
87 | 'update_obj';... update the object representation graph and its projection field, record it in the uvmat interface
|
---|
88 | 'update_waitbar';... update the waitbar display, used for ACTION functions in the GUI 'series'
|
---|
89 | 'write_plot_param'};%update plotting parameters after plot
|
---|
90 | dir_fct=which('uvmat');% path to uvmat
|
---|
91 | [pathuvmat,name,ext]=fileparts(dir_fct);
|
---|
92 | icount=0;
|
---|
93 | % loop on the list of functions in the uvmat package
|
---|
94 | for i=1:length(list_fct)
|
---|
95 | dir_fct=which(list_fct{i});% path to fct
|
---|
96 | if isempty(dir_fct)
|
---|
97 | icount=icount+1;
|
---|
98 | errormsg{icount}=[list_fct{i} ' not found'];% test for function not found
|
---|
99 | else
|
---|
100 | [pth,name,ext]=fileparts(dir_fct);
|
---|
101 | if ~isequal(pathuvmat,pth)&~isequal(fullfile(pathuvmat,'private'),pth)
|
---|
102 | icount=icount+1;
|
---|
103 | errormsg{icount}=[dir_fct ' overrides the package UVMAT'];% bad path for the function
|
---|
104 | end
|
---|
105 | datfile=dir(dir_fct);
|
---|
106 | date_str=datfile.date;%string of the date of last modification
|
---|
107 | datnum(i)=0;%default
|
---|
108 | try
|
---|
109 | datnum(i)=datenum(date_str);
|
---|
110 | catch
|
---|
111 | datnum(i)=0;%in case of error with datenum (e.g. date in french)
|
---|
112 | end
|
---|
113 | end
|
---|
114 | end
|
---|
115 | errormsg=errormsg';
|
---|
116 | date_str=datestr(max(datnum));
|
---|