%'datatree_browser': function for scanning directories in a campaign %------------------------------------------------------------------------ % function varargout = series(varargin) % associated with the GUI datatree_browser.fig %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA % This file is part of the toolbox UVMAT. % % UVMAT is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published by % the Free Software Foundation; either version 2 of the License, or % (at your option) any later version. % % UVMAT is distributed in the hope that it will be useful, % but WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License (file UVMAT/COPYING.txt) for more details. %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA function varargout = datatree_browser(varargin) % Last Modified by GUIDE v2.5 29-Jul-2012 08:49:20 % Begin initialization code - DO NOT EDIT gui_Singleton = 1; gui_State = struct('gui_Name', mfilename, ... 'gui_Singleton', gui_Singleton, ... 'gui_OpeningFcn', @datatree_browser_OpeningFcn, ... 'gui_OutputFcn', @datatree_browser_OutputFcn, ... 'gui_LayoutFcn', [] , ... 'gui_Callback', []); if nargin && ischar(varargin{1}) && ~isempty(regexp(varargin{1},'_Callback','once')) gui_State.gui_Callback = str2func(varargin{1}); end if nargout [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); else gui_mainfcn(gui_State, varargin{:}); end % End initialization code - DO NOT EDIT %------------------------------------------------------------------------ % --- Executes just before datatree_browser is made visible. function datatree_browser_OpeningFcn(hObject, eventdata, handles, InputName) %------------------------------------------------------------------------ % Choose default command line output for datatree_browser handles.output = 'Cancel'; % Update handles structure guidata(hObject, handles); testCancel=1; testinputstring=0; icontype='quest';%default question icon (text input asked) % Determine the position of the dialog - centered on the screen FigPos=get(0,'DefaultFigurePosition'); OldUnits = get(hObject, 'Units'); set(hObject, 'Units', 'pixels'); OldPos = get(hObject,'Position'); FigWidth = OldPos(3); FigHeight = OldPos(4); ScreenUnits=get(0,'Units'); set(0,'Units','pixels'); ScreenSize=get(0,'ScreenSize'); set(0,'Units',ScreenUnits); FigPos(1)=1/2*(ScreenSize(3)-FigWidth); FigPos(2)=2/3*(ScreenSize(4)-FigHeight); FigPos(3:4)=[FigWidth FigHeight]; set(hObject, 'Position', FigPos); set(hObject, 'Units', OldUnits); if exist('InputName','var') if isdir(InputName)% opening by uvmat/MenuSetProject set(handles.SourceDir,'String',InputName)% the input directory is considered as a project set(handles.LinkDir,'Visible','off') set(handles.UpdateLink,'String','create_link') set(handles.MarkupDir,'Visible','on') else% opening by uvmat/Open InputDir=regexprep(InputName,'.xml$',''); if exist(InputDir,'dir') s=xml2struct(InputName); if isfield(s,'SourceDir') set(handles.SourceDir,'String',s.SourceDir) set(handles.LinkDir,'String',InputDir) set(handles.LinkDir,'Visible','on') else set(handles.SourceDir,'String',InputDir) set(handles.LinkDir,'Visible','off') set(handles.MarkupDir,'String','CreateLink') end end end FillExperiments(handles) set(handles.OK,'Visible','on') drawnow end %------------------------------------------------------------------------ % --- Outputs from this function are returned to the command line. function varargout = datatree_browser_OutputFcn(hObject, eventdata, handles) %------------------------------------------------------------------------ % Get default command line output from handles structure varargout{1} = handles.output; %delete(handles.datatree_browser) %------------------------------------------------------------------------ % --- Executes on button press in MarkupDir: create a xml file to mark SourceDir as project source function MarkupDir_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ SourceDir=get(handles.SourceDir,'String'); t=xmltree; t=set(t,1,'name','Project'); try save(t,[SourceDir '.xml']) catch ME msgbox_uvmat('ERROR',ME.message) end %------------------------------------------------------------------------ % --- Executes on button press in UpdateLink: create a link dir or update it if it exists function UpdateLink_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ [SourcePath,ProjectName]=fileparts(get(handles.SourceDir,'String')); LinkDir=get(handles.LinkDir,'String'); if isempty(LinkDir)||strcmp(get(handles.LinkDir,'Visible'),'off') LinkRoot=uigetdir(LinkDir,'pick up the path to the link directory'); %file browser if isempty(LinkRoot),return,end LinkDir=fullfile(LinkRoot,[ProjectName '.link']); set(handles.LinkDir,'Visible','on') set(handles.LinkDir,'String',LinkDir) end if ~exist(LinkDir,'dir') try mkdir(LinkDir) catch ME msgbox_uvmat('ERROR',ME.message) end end LinkDirXml=fullfile(fileparts(LinkDir),[ProjectName '.link.xml']); if ~exist(LinkDirXml,'file') LinkDoc.SourceDir=get(handles.SourceDir,'String'); t=struct2xml(LinkDoc); t=set(t,1,'name','Project'); save(t,LinkDirXml) set(handles.UpdateLink,'String','update_link') end FillExperiments(handles) %------------------------------------------------------------------------ % --- Fill the column 'Experiments' with the list of detected directries function FillExperiments(handles) %------------------------------------------------------------------------ SourceDir=get(handles.SourceDir,'String'); LinkDir=''; if strcmp(get(handles.LinkDir,'Visible'),'on') LinkDir=get(handles.LinkDir,'String'); end hdir=dir(SourceDir); %list files and dirs idir=0; ExpName=cell(length(hdir),1); for ilist=1:length(hdir) if hdir(ilist).isdir dirname=hdir(ilist).name; if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0')% do not list directories beginning by '0' idir=idir+1; ExpName{idir}=hdir(ilist).name; if ~isempty(LinkDir) link=fullfile(LinkDir,ExpName{idir}); if ~exist(link,'dir') mkdir(link)% create the directory containing links end end end end end set(handles.ListExperiments,'String',[{'*'};ExpName(1:idir)]) set(handles.ListExperiments,'Value',1) ListExperiments_Callback([],[], handles) %------------------------------------------------------------------------ % --- Executes on selection change in ListExperiments. function ListExperiments_Callback(hObject,eventdata,handles) %------------------------------------------------------------------------ SourcePath=get(handles.SourceDir,'String'); MirrorPath=''; if strcmp(get(handles.LinkDir,'Visible'),'on') MirrorPath=get(handles.LinkDir,'String'); end ListExperiments=get(handles.ListExperiments,'String'); if isequal(get(handles.ListExperiments,'Value'),1) ListExperiments=ListExperiments(2:end); %choose all experiments if the first line '*' has been selected else ListExperiments=ListExperiments(get(handles.ListExperiments,'Value')); end ListDevices={}; %% loop on the list of selected experiments for iexp=1:numel(ListExperiments) % update the directory of the sources and update the links in the case of a link dir hdir=dir(fullfile(SourcePath,ListExperiments{iexp})); %list files and folders in the source for ilist=1:length(hdir) Device=hdir(ilist).name; if ~isequal(Device(1),'.') if ~isempty(MirrorPath)% we list the links to the data directories of files link=fullfile(MirrorPath,ListExperiments{iexp},Device); if ~exist(link)% create a link if it does not exist source=fullfile(SourcePath,ListExperiments{iexp},Device); system(['ln -s ' source ' ' link])%TODO translate for DOS end Device=['@' Device]; end if hdir(ilist).isdir Device=[Device '/']; end check_list=strcmp(Device,ListDevices); if isempty(find(check_list)) ListDevices=[ListDevices;Device]; end end end % check for dir and files in the link dir which do not exist in the source dir if ~isempty(MirrorPath) hdir=dir(fullfile(MirrorPath,ListExperiments{iexp})); %list files and folders in the link dir for ilist=1:length(hdir) Device=hdir(ilist).name; if ~isequal(Device(1),'.') if hdir(ilist).isdir Device=[Device '/']; end check_list=strcmp(Device,ListDevices) | strcmp(['@' Device],ListDevices); if isempty(find(check_list)) ListDevices=[ListDevices;Device]; end end end end end %% display the updated list, keeping track of the previously selected item PreviousList=get(handles.ListDevices,'String'); NewValue=[]; if ~isempty(PreviousList)&&iscell(PreviousList) PreviousDevice=PreviousList{get(handles.ListDevices,'Value')}; NewValue=find(strcmp(PreviousDevice,ListDevices)); end if isempty(NewValue) NewValue=1; end set(handles.ListDevices,'Value',NewValue) set(handles.ListDevices,'String',ListDevices) %------------------------------------------------------------------------ % --- Executes on selection in column ListDevices function ListDevices_Callback(hObject, eventdata, handles) %------------------------------------------------------------------------ list_val=get(handles.ListExperiments,'Value'); if isequal(list_val,1) || numel(list_val)~=1 msgbox_uvmat('ERROR','select a single experiment in the column ''Experiments''') return end ListExperiments=get(handles.ListExperiments,'String'); Experiment=ListExperiments{list_val}; RootPath=''; if strcmp(get(handles.LinkDir,'Visible'),'on') RootPath=get(handles.LinkDir,'String'); end if isempty(RootPath) RootPath=get(handles.SourceDir,'String'); end ListDevices=get(handles.ListDevices,'String'); Device=ListDevices{get(handles.ListDevices,'Value')}; Device=regexprep(Device,'^@',''); %% open the selected file % case of a directory, open a file inside if strcmp(Device(end),'/') DataDir=fullfile(RootPath,Experiment,Device(1:end-1)); DirList=dir(DataDir); for ilist=1:numel(DirList) if ~DirList(ilist).isdir [tild,tild,FileExt]=fileparts(DirList(ilist).name); FileExt=regexprep(FileExt,'^.',''); if ~isempty(FileExt) && (~isempty(imformats(FileExt))||strcmp(lower(FileExt),'avi')||strcmp(lower(FileExt),'nc')) uvmat(fullfile(DataDir,DirList(ilist).name)) return end end end % open browser if no valid input file has been detected [FileName, PathName] = uigetfile( ... { '*.*', 'All Files (*.*)'}, ... 'Pick a mask file *.png',DataDir); if ~isempty(FileName) uvmat(fullfile(PathName,FileName)); return end else %case of a file uvmat(fullfile(RootPath,Experiment,Device)) return end %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % %------------------------------------------------------------------------ % % --- Executes on selection change in ListRecords. % function ListRecords_Callback(hObject, eventdata, handles) % Value=get(handles.ListRecords,'Value'); % if isequal(Value(1),1) % set(handles.ListRecords,'Value',1); % end % %------------------------------------------------------------------------ % % --- Executes on button press in CampaignDoc. % function CampaignDoc_Callback(hObject, eventdata, handles) % %------------------------------------------------------------------------ % answer=msgbox_uvmat('INPUT_Y-N','This function will update the global xml rpresentation of the data set and the Heading of each xml file') % if ~isequal(answer{1},'OK') % return % end % set(handles.ListExperiments,'Value',1) % ListExperiments_Callback(handles)%update the overview of the experiment directories % DataviewData=get(handles.datatree_browser,'UserData'); % List=DataviewData.List; % Currentpath=get(handles.SourceDir,'String'); % [Currentpath,Campaign,DirExt]=fileparts(Currentpath); % Campaign=[Campaign DirExt]; % t=xmltree; % t=set(t,1,'name','CampaignDoc'); % t = attributes(t,'add',1,'source','directory'); % SubCampaignTest=get(handles.SubCampaignTest,'Value'); % root_uid=1; % if SubCampaignTest % %TO DO open an exoiting xml doc % [t,root_uid]=add(t,1,'element','SubCampaign'); % t =attributes(t,'add',root_uid,'DirName',Campaign); % end % for iexp=1:length(List.Experiment) % set(handles.ListExperiments,'Value',iexp+1) % drawnow % test_mod=0; % [t,uid_exp]=add(t,root_uid,'element','Experiment'); % t = attributes(t,'add',uid_exp,'i',num2str(iexp)); % ExpName=List.Experiment{iexp}.name; % t = attributes(t,'add',uid_exp,'DirName',List.Experiment{iexp}.name); % % if isfield(List.Experiment{iexp},'Device') % for idevice=1:length(List.Experiment{iexp}.Device) % [t,uid_device]=add(t,uid_exp,'element','Device'); % DeviceName=List.Experiment{iexp}.Device{idevice}.name; % t = attributes(t,'add',uid_device,'DirName',List.Experiment{iexp}.Device{idevice}.name); % if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; % [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,[],FileName,SubCampaignTest); % if test % [List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} ' , Heading updated'] % end % if isequal(Title,'ImaDoc') % [t,uid_xml]=add(t,uid_device,'element','ImaDoc'); % t = attributes(t,'add',uid_xml,'source','file'); % [t]=add(t,uid_xml,'chardata',List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}); % end % end % elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') % for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) % RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; % [t,uid_record]=add(t,uid_device,'element','Record'); % t = attributes(t,'add',uid_record,'DirName',RecordName); % if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; % [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,RecordName,FileName,SubCampaignTest); % if test % [FileName ' , Heading updated'] % end % [t,uid_xml]=add(t,uid_record,'element','ImaDoc'); % t = attributes(t,'add',uid_xml,'source','file'); % [t]=add(t,uid_xml,'chardata',FileName); % end % end % end % end % end % end % end % set(handles.ListExperiments,'Value',1) % outputdir=get(handles.SourceDir,'String'); % [path,dirname]=fileparts(outputdir); % outputfile=fullfile(outputdir,[dirname '.xml']); % %campaigndoc(t); % save(t,outputfile) % % %------------------------------------------------------------------------ % % --- Executes on button press in CampaignDoc. % function edit_xml_Callback(hObject, eventdata, handles) % %------------------------------------------------------------------------ % CurrentPath=get(handles.SourceDir,'String'); % %[CurrentPath,Name,Ext]=fileparts(CurrentDir); % ListExperiments=get(handles.ListExperiments,'String'); % Value=get(handles.ListExperiments,'Value'); % if ~isequal(Value,1) % ListExperiments=ListExperiments(Value); % end % ListDevices=get(handles.ListDevices,'String'); % Value=get(handles.ListDevices,'Value'); % if ~isequal(Value,1) % ListDevices=ListDevices(Value); % end % ListRecords=get(handles.ListRecords,'String'); % Value=get(handles.ListRecords,'Value'); % if ~isequal(Value,1) % ListRecords=ListRecords(Value); % end % [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); % ListXml=get(handles.ListXml,'String'); % Value=get(handles.ListXml,'Value'); % set(handles.ListXml,'Value',Value(1)); % if isequal(Value(1),1) % msgbox_uvmat('ERROR','an xml file needs to be selected') % return % else % XmlName=ListXml{Value(1)}; % end % for iexp=1:length(List.Experiment) % ExpName=List.Experiment{iexp}.name; % if isfield(List.Experiment{iexp},'Device') % for idevice=1:length(List.Experiment{iexp}.Device) % DeviceName=List.Experiment{iexp}.Device{idevice}.name; % if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} % if isequal(FileName,XmlName) % editxml(fullfile(CurrentPath,ExpName,DeviceName,FileName)); % return % end % end % elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') % for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) % RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; % if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; % if isequal(FileName,XmlName) % editxml(fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName)); % return % end % end % end % end % end % end % end % end % % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % CurrentPath/Campaign: root directory % function [Title,test_mod]=check_heading(Currentpath,Campaign,Experiment,Device,Record,xmlname,testSubCampaign) % % %Shema for Heading: % % Campaign % % (SubCampaign) % % Experiment % % Device % % (Record) % % ImageName % % DateExp % % old: %Project: suppressed ( changed to Campaign) % %Exp: suppressed (changed to experiment) % %ImaNames: changed to ImageName % if exist('Record','var') && ~isempty(Record) % xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,Record,xmlname); % testrecord=1; % else % xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,xmlname); % testrecord=0; % end % if ~exist('testSubCampaign','var') % testSubCampaign=0; % end % if testSubCampaign % SubCampaign=Campaign; % [Currentpath,Campaign,DirExt]=fileparts(Currentpath); % Campaign=[Campaign DirExt]; % end % test_mod=0; %test for the modification of the xml file % t_device=xmltree(xmlfullname); % Title=get(t_device,1,'name'); % uid_child=children(t_device,1); % Heading_old=[]; % uidheading=0; % for ilist=1:length(uid_child) % name=get(t_device,uid_child(ilist),'name'); % if isequal(name,'Heading') % uidheading=uid_child(ilist); % end % end % if uidheading % subt=branch(t_device,uidheading); % Heading_old=convert(subt); % else % return % do not edit xml files without element 'Heading' % end % if ~(isfield(Heading_old,'Campaign')&& isequal(Heading_old.Campaign,Campaign)) % test_mod=1; % end % Heading.Campaign=Campaign; % if testSubCampaign % if ~(isfield(Heading_old,'SubCampaign')&& isequal(Heading_old.SubCampaign,SubCampaign)) % test_mod=1; % end % Heading.SubCampaign=SubCampaign; % end % if ~(isfield(Heading_old,'Experiment')&& isequal(Heading_old.Experiment,Experiment)) % test_mod=1; % end % Heading.Experiment=Experiment; % if ~(isfield(Heading_old,'Device')&& isequal(Heading_old.Device,Device)) % test_mod=1; % end % Heading.Device=Device; % if testrecord % if ~(isfield(Heading_old,'Record')&& isequal(Heading_old.Record,Record)) % test_mod=1; % end % Heading.Record=Record; % end % if isfield(Heading_old,'ImaNames') % test_mod=1; % if ~isempty(Heading_old.ImaNames) % Heading.ImageName=Heading_old.ImaNames; % end % end % if isfield(Heading_old,'ImageName')&& ~isempty(Heading_old.ImageName) % Heading.ImageName=Heading_old.ImageName; % end % if isfield(Heading_old,'DateExp')&& ~isempty(Heading_old.DateExp) % Heading.DateExp=Heading_old.DateExp; % end % if test_mod && uidheading % uid_child=children(t_device,uidheading); % t_device=delete(t_device,uid_child); % t_device=struct2xml(Heading,t_device,uidheading); % backupfile=xmlfullname; % testexist=2; % while testexist==2 % backupfile=[backupfile '~']; % testexist=exist(backupfile,'file'); % end % [success,message]=copyfile(xmlfullname,backupfile);%make backup % if isequal(success,1) % delete(xmlfullname) % else % return % end % save(t_device,xmlfullname) % end %------------------------------------------------------------------------ % --- Executes on button press in HELP. function HELP_Callback(hObject, eventdata, handles) path_to_uvmat=which ('uvmat')% check the path of uvmat pathelp=fileparts(path_to_uvmat); helpfile=fullfile(pathelp,'UVMAT_DOC','uvmat_doc.html'); if isempty(dir(helpfile)), msgbox_uvmat('ERROR','Please put the help file uvmat_doc.html in the directory UVMAT/UVMAT_DOC') else web([helpfile '#dataview']) end % % % % --- Executes on selection change in ListXml. % function ListXml_Callback(hObject, eventdata, handles) % Value=get(handles.ListXml,'Value'); % if isequal(Value(1),1) % set(handles.ListXml,'Value',1); % end % --- Executes on button press in clean_civ_cmx. function clean_civ_cmx_Callback(hObject, eventdata, handles) message='this function will delete all files with extensions .log, .bat, .cmx,.cmx2,.errors in the input directory(ies)'; answer=msgbox_uvmat('INPUT_Y-N',message); if ~isequal(answer,'Yes') return end set(handles.ListExperiments,'Value',1) ListDataDir(hObject, eventdata, handles)%update the overview of the experiment directories DataviewData=get(handles.datatree_browser,'UserData') List=DataviewData.List; Currentpath=get(handles.SourceDir,'String'); [Currentpath,Campaign,DirExt]=fileparts(Currentpath); Campaign=[Campaign DirExt]; SubCampaignTest=get(handles.SubCampaignTest,'Value'); nbdelete_tot=0; for iexp=1:length(List.Experiment) set(handles.ListExperiments,'Value',iexp+1) drawnow test_mod=0; ExpName=List.Experiment{iexp}.name; nbdelete=0; if isfield(List.Experiment{iexp},'Device') for idevice=1:length(List.Experiment{iexp}.Device) DeviceName=List.Experiment{iexp}.Device{idevice}.name; if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') currentdir=fullfile(Currentpath,Campaign,ExpName,DeviceName); hdir=dir(currentdir); %list files and dirs idir=0; for ilist=1:length(hdir) if hdir(ilist).isdir dirname=hdir(ilist).name; if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0') CivDir=fullfile(currentdir,dirname) hCivDir=dir(CivDir); for ilist=1:length(hCivDir) FileName=hCivDir(ilist).name; [dd,ff,Ext]=fileparts(FileName); if isequal(Ext,'.log')||isequal(Ext,'.bat')||isequal(Ext,'.cmx')||isequal(Ext,'.cmx2')|| isequal(Ext,'.errors') delete(fullfile(CivDir,FileName)) nbdelete=nbdelete+1; end end end end end elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') 'look at subdirectories' end end end end end display([num2str(nbdelete) ' files deleted']) nbdelete_tot=nbdelete_tot+nbdelete; end msgbox_uvmat('CONFIRMATION',['END: ' num2str(nbdelete_tot) ' files deleted by clean_civ_cmx']) set(handles.ListExperiments,'Value',1) % % % --- Executes on button press in OK. % function OK_Callback(hObject, eventdata, handles) % %------------------------------------------------------------------------ % CurrentPath=get(handles.SourceDir,'String'); % ListExperiments=get(handles.ListExperiments,'String'); % IndicesExp=get(handles.ListExperiments,'Value'); % if ~isequal(IndicesExp,1) % ListExperiments=ListExperiments(IndicesExp); % end % ListDevices=get(handles.ListDevices,'String'); % Value=get(handles.ListDevices,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','manually select in the GUI dataview the device being calibrated') % return % else % ListDevices=ListDevices(Value); % end % ListRecords=get(handles.ListRecords,'String'); % Value=get(handles.ListRecords,'Value'); % if ~isequal(Value,1) % ListRecords=ListRecords(Value); % end % [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); % ListXml=get(handles.ListXml,'String'); % Value=get(handles.ListXml,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','you need to select in the GUI dataview the xml files to edit') % return % else % ListXml=ListXml(Value); % end % % %update all the selected xml files % DataviewData=get(handles.datatree_browser,'UserData'); % % answer=msgbox_uvmat('INPUT_Y-N',[num2str(length(Value)) ' xml files for device ' ListDevices{1} ' will be refreshed with ' ... % % DataviewData.GeometryCalib.CalibrationType ' calibration data']) % % if ~isequal(answer,'Yes') % % return % % end % %List.Experiment{1}.Device{1} % %List.Experiment{2}.Device{1} % for iexp=1:length(List.Experiment) % ExpName=List.Experiment{iexp}.name; % set(handles.ListExperiments,'Value',IndicesExp(iexp)); % if isfield(List.Experiment{iexp},'Device') % for idevice=1:length(List.Experiment{iexp}.Device) % DeviceName=List.Experiment{iexp}.Device{idevice}.name; % if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; % for ilistxml=1:length(ListXml) % if isequal(FileName,ListXml{ilistxml}) % set(handles.ListXml,'Value',Value(ilistxml)) % drawnow % xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,FileName); % update_imadoc(DataviewData.GeometryCalib,xmlfullname) % display([xmlfullname ' updated']) % break % end % end % end % elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') % for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) % RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; % if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') % for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) % FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; % for ilistxml=1:length(ListXml) % if isequal(FileName,ListXml{ilistxml}) % set(handles.ListXml,'Value',Value(ilistxml)) % drawnow % xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName); % update_imadoc(DataviewData.GeometryCalib,xmlfullname) % display([xmlfullname ' updated']) % break % end % end % end % end % end % end % end % end % end % set(handles.ListXml,'Value',Value) % % % % % % % % CurrentPath=get(handles.SourceDir,'String');%= get(hObject,'String'); % ListExperiments=get(handles.ListExperiments,'String'); % Value=get(handles.ListExperiments,'Value'); % if ~isequal(Value,1) % ListExperiments=ListExperiments(Value); % end % ListDevices=get(handles.ListDevices,'String'); % Value=get(handles.ListDevices,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','manually select in the GUI datatree_browser the device being calibrated') % return % else % ListDevices=ListDevices(Value); % end % ListRecords=get(handles.ListRecords,'String'); % Value=get(handles.ListRecords,'Value'); % if ~isequal(Value,1) % ListRecords=ListRecords(Value); % end % [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); % ListXml=get(handles.ListXml,'String'); % Value=get(handles.ListXml,'Value'); % if isequal(Value,1) % msgbox_uvmat('ERROR','you need to select in the GUI datatree_browser the xml files to edit') % return % else % ListXml=ListXml(Value); % end % handles.output.CurrentPath=CurrentPath; % handles.output.ListExperiments=ListExperiments; % handles.output.ListDevices=ListDevices; % handles.output.ListRecords=ListRecords; % handles.output.ListXml=ListXml; % handles.output.List=List; handles.output ='OK, Calibration replicated'; guidata(hObject, handles);% Update handles structure uiresume(handles.datatree_browser); % % % --- Executes on button press in Cancel. % function Cancel_Callback(hObject, eventdata, handles) % handles.output = get(hObject,'String'); % guidata(hObject, handles); % Update handles structure % % Use UIRESUME instead of delete because the OutputFcn needs % uiresume(handles.datatree_browser); % --- Executes when user attempts to close datatree_browser. function datatree_browser_CloseRequestFcn(hObject, eventdata, handles) % if isequal(get(handles.datatree_browser, 'waitstatus'), 'waiting') % % The GUI is still in UIWAIT, us UIRESUME % uiresume(handles.datatree_browser); % else % % The GUI is no longer waiting, just close it % delete(handles.datatree_browser); % end delete(hObject)