[784] | 1 | %'get_file_info': determine info about a file (image, multimage, civdata,...) . |
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| 2 | %------------------------------------------------------------------------ |
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| 3 | % [FileInfo,VideoObject]=get_file_info(fileinput) |
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| 4 | % |
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| 5 | % OUTPUT: |
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| 6 | % FileInfo: structure containing info on the file (case of images or video), in particular |
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| 7 | % .FileType: type of file, needed as input of read_field.m |
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[1009] | 8 | % .FileIndexing='on' for data files (when series of indexed files are expected) |
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[784] | 9 | % .Height: image height in pixels |
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| 10 | % .Width: image width in pixels |
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| 11 | % .BitDepth: nbre of bits per pixel (8 of 16) |
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| 12 | % .ColorType: 'greyscale' or 'color' |
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| 13 | % .NumberOfFrames |
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| 14 | % .FrameRate: nbre of frames per second, =[] for images |
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| 15 | % VideoObject: in case of video |
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| 16 | % |
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| 17 | % INPUT: |
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| 18 | % fileinput: name, including path, of the file to analyse |
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[809] | 19 | |
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| 20 | %======================================================================= |
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[1027] | 21 | % Copyright 2008-2018, LEGI UMR 5519 / CNRS UGA G-INP, Grenoble, France |
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[809] | 22 | % http://www.legi.grenoble-inp.fr |
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| 23 | % Joel.Sommeria - Joel.Sommeria (A) legi.cnrs.fr |
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| 24 | % |
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| 25 | % This file is part of the toolbox UVMAT. |
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| 26 | % |
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| 27 | % UVMAT is free software; you can redistribute it and/or modify |
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| 28 | % it under the terms of the GNU General Public License as published |
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| 29 | % by the Free Software Foundation; either version 2 of the license, |
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| 30 | % or (at your option) any later version. |
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| 31 | % |
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| 32 | % UVMAT is distributed in the hope that it will be useful, |
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| 33 | % but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 34 | % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 35 | % GNU General Public License (see LICENSE.txt) for more details. |
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| 36 | %======================================================================= |
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| 37 | |
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[784] | 38 | function [FileInfo,VideoObject]=get_file_info(fileinput) |
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| 39 | VideoObject=[]; |
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[1022] | 40 | if ~isempty(regexp(fileinput,'^http://'))|| exist(fileinput,'file') |
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[784] | 41 | FileInfo.FileName=fileinput; |
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| 42 | FileInfo.FileType='txt'; %default |
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| 43 | else |
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| 44 | FileInfo.FileType=''; |
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| 45 | return |
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| 46 | end |
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| 47 | [tild,tild,FileExt]=fileparts(fileinput);%get the file extension FileExt |
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| 48 | |
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| 49 | switch FileExt |
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| 50 | case '.fig' |
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| 51 | FileInfo.FileType='figure'; |
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| 52 | case {'.xml','.xls','.dat','.bin'} |
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| 53 | FileInfo.FileType=regexprep(FileExt,'^.','');% eliminate the dot of the extension; |
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[790] | 54 | case {'.seq','.sqb'} |
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| 55 | [A,FileInfo,timestamps,errormsg]=read_rdvision(fileinput,[]); |
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[991] | 56 | % %%%%% |
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| 57 | % FileInfo.NumberOfFrame=24000; |
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| 58 | % %%%%%%%% |
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[1007] | 59 | case '.im7' |
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| 60 | try |
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| 61 | Input=readimx(fileinput); |
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| 62 | Image=Input.Frames{1}.Components{1}.Planes{1}; |
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| 63 | FileInfo.FileType='image_DaVis'; |
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| 64 | FileInfo.NumberOfFrames=numel(Input.Frames); |
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| 65 | FileInfo.Height=size(Image,2); |
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| 66 | FileInfo.Width=size(Image,1); |
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| 67 | catch ME |
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| 68 | msgbox_uvmat('ERROR',ME.message) |
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| 69 | return |
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| 70 | end |
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[946] | 71 | case '.h5' |
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| 72 | hinfo=hdf5info(fileinput); |
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| 73 | if strcmp(hinfo.GroupHierarchy.Attributes(1).Value.Data,'MultipassPIVResults') |
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| 74 | FileInfo.FileType='pivdata_fluidimage'; |
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| 75 | FileInfo.CivStage=6; % A MODIFIER |
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| 76 | end |
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[979] | 77 | case '.cine' |
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| 78 | [FileInfo,BitmapInfoHeader, CameraSetup]=readCineHeader(fileinput); |
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| 79 | FileInfo.FileType='cine_phantom'; |
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| 80 | FileInfo.NumberOfFrames=FileInfo.ImageCount; |
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| 81 | FileInfo.FrameRate=CameraSetup.FrameRate; |
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| 82 | FileInfo.Height=BitmapInfoHeader.biHeight; |
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| 83 | FileInfo.Width=BitmapInfoHeader.biWidth; |
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[991] | 84 | FileInfo.BitDepth=BitmapInfoHeader.biBitCount; |
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[784] | 85 | otherwise |
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| 86 | if ~isempty(FileExt)% exclude empty extension |
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| 87 | FileExt=regexprep(FileExt,'^.','');% eliminate the dot of the extension |
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| 88 | if ~isempty(FileExt) |
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| 89 | if ~isempty(imformats(FileExt))%case of images |
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| 90 | try |
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| 91 | imainfo=imfinfo(fileinput); |
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| 92 | if length(imainfo) >1 %case of image with multiple frames |
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| 93 | FileInfo=imainfo(1);%take info from the first frame |
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| 94 | FileInfo.NumberOfFrames=length(imainfo); |
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| 95 | FileInfo.FileType='multimage'; |
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| 96 | else |
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| 97 | FileInfo=imainfo; |
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| 98 | FileInfo.NumberOfFrames=1; |
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| 99 | FileInfo.FileType='image'; |
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| 100 | end |
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| 101 | FileInfo.FileName=FileInfo.Filename; %correct the info given by imfinfo |
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| 102 | nbfield=numel(fieldnames(FileInfo)); |
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| 103 | FileInfo=orderfields(FileInfo,[nbfield nbfield-1 nbfield-2 (1:nbfield-3)]); %reorder the fields of fileInfo for clarity |
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| 104 | end |
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| 105 | else |
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| 106 | error_nc=0; |
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| 107 | try |
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| 108 | [Data,tild,tild,errormsg]=nc2struct(fileinput,[]); |
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| 109 | if ~isempty(errormsg) |
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| 110 | error_nc=1; |
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| 111 | else |
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| 112 | if isfield(Data,'absolut_time_T0') && isfield(Data,'hart') && ~isempty(Data.absolut_time_T0) && ~isempty(Data.hart) |
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| 113 | FileInfo.FileType='civx'; |
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| 114 | if isfield(Data,'patch2') && isequal(Data.patch2,1) |
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| 115 | FileInfo.CivStage=6; |
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| 116 | elseif isfield(Data,'fix2') && isequal(Data.fix2,1) |
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| 117 | FileInfo.CivStage=5; |
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| 118 | elseif isfield(Data,'civ2')&& isequal(Data.civ2,1) |
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| 119 | FileInfo.CivStage=4; |
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| 120 | elseif isfield(Data,'patch')&&isequal(Data.patch,1) |
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| 121 | FileInfo.CivStage=3; |
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| 122 | elseif isfield(Data,'fix')&&isequal(Data.fix,1) |
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| 123 | FileInfo.CivStage=2; |
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| 124 | else |
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| 125 | FileInfo.CivStage=1; |
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| 126 | end |
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| 127 | elseif isfield(Data,'Conventions') && strcmp(Data.Conventions,'uvmat/civdata') |
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| 128 | FileInfo.FileType='civdata'; % test for civx velocity fields |
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| 129 | FileInfo.CivStage=Data.CivStage; |
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| 130 | else |
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| 131 | FileInfo.FileType='netcdf'; |
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| 132 | FileInfo.ListVarName=Data.ListVarName; |
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| 133 | end |
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| 134 | end |
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| 135 | catch ME |
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| 136 | error_nc=1; |
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| 137 | end |
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| 138 | if error_nc |
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| 139 | try |
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| 140 | if exist('VideoReader.m','file')%recent version of Matlab |
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| 141 | VideoObject=VideoReader(fileinput); |
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| 142 | FileInfo=get(VideoObject); |
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| 143 | FileInfo.FileType='video'; |
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| 144 | elseif exist('mmreader.m','file')% Matlab 2009a |
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| 145 | VideoObject=mmreader(fileinput); |
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| 146 | FileInfo=get(VideoObject); |
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| 147 | FileInfo.FileType='mmreader'; |
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| 148 | end |
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| 149 | FileInfo.BitDepth=FileInfo.BitsPerPixel/3; |
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| 150 | FileInfo.ColorType='truecolor'; |
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| 151 | FileInfo.FileName=fileinput; |
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| 152 | nbfield=numel(fieldnames(FileInfo)); |
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| 153 | FileInfo=orderfields(FileInfo,[nbfield nbfield-3 nbfield-1 nbfield-2 (1:nbfield-4)]); %reorder the fields of fileInfo for clarity |
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[1025] | 154 | if ~isfield(FileInfo,'NumberOfFrames') |
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| 155 | FileInfo.NumberOfFrames=floor(FileInfo.Duration*FileInfo.FrameRate); |
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| 156 | end |
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[784] | 157 | end |
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| 158 | end |
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| 159 | end |
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| 160 | end |
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| 161 | end |
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[790] | 162 | end |
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| 163 | switch FileInfo.FileType |
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[1007] | 164 | case {'image','image_DaVis','multimage','mmreader','cine_phantom','video','netcdf','civdata'} |
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[790] | 165 | FileInfo.FileIndexing='on'; % allow to detect file index for scanning series |
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[809] | 166 | end |
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