| 1 | %'update_imadoc': update an xml file with geometric calibration parameters |
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| 2 | %-------------------------------------------------------------------------- |
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| 3 | % function [checkcreate,xmlfile,errormsg]=update_imadoc(Struct,RootPath,SubDir,StructName) |
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| 4 | % |
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| 5 | % OUTPUT: |
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| 6 | % checkupdate= 1 if the xml file (containing timing)already exist, =0 when it has to be created |
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| 7 | % xmlfile: name of the xmlfile containing the the calibration data |
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| 8 | % errormsg: error message, ='' if OK |
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| 9 | |
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| 10 | % INPUT: |
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| 11 | |
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| 12 | % RootPath: path to the folder containing the image series to calibrate |
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| 13 | % SubDir: folder contaiting the image series to calibrate |
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| 14 | % StructName : Name of the field in the xml file |
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| 15 | % Struct: Matlab structure containing the calibration parameters |
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| 16 | % checkbackup=1 (default): backup of existing xml file as .xml~, |
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| 17 | %------------------------------------------------------------- |
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| 18 | |
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| 19 | %======================================================================= |
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| 20 | % Copyright 2008-2024, LEGI UMR 5519 / CNRS UGA G-INP, Grenoble, France |
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| 21 | % http://www.legi.grenoble-inp.fr |
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| 22 | % Joel.Sommeria - Joel.Sommeria (A) univ-grenoble-alpes.fr |
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| 23 | % |
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| 24 | % This file is part of the toolbox UVMAT. |
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| 25 | % |
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| 26 | % UVMAT is free software; you can redistribute it and/or modify |
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| 27 | % it under the terms of the GNU General Public License as published |
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| 28 | % by the Free Software Foundation; either version 2 of the license, |
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| 29 | % or (at your option) any later version. |
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| 30 | % |
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| 31 | % UVMAT is distributed in the hope that it will be useful, |
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| 32 | % but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 33 | % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 34 | % GNU General Public License (see LICENSE.txt) for more details. |
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| 35 | %======================================================================= |
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| 36 | |
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| 37 | function [checkupdate,xmlfile,errormsg]=update_imadoc(RootPath,SubDir,StructName,Struct,checkbackup) |
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| 38 | |
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| 39 | errormsg=''; |
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| 40 | if ~exist('checkbackup','var') |
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| 41 | checkbackup=1; |
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| 42 | end |
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| 43 | |
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| 44 | %% set the output xml file at the root, hide other existing xml files |
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| 45 | xmlfile=find_imadoc(RootPath,SubDir); |
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| 46 | if isempty(xmlfile) |
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| 47 | checkupdate=0; |
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| 48 | else |
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| 49 | checkupdate=1; |
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| 50 | end |
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| 51 | |
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| 52 | %% backup the existing xml file, adding a ~ to its name |
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| 53 | if checkupdate |
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| 54 | if checkbackup |
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| 55 | backupfile=xmlfile; |
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| 56 | testexist=2; |
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| 57 | while testexist==2 |
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| 58 | backupfile=[backupfile '~']; |
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| 59 | testexist=exist(backupfile,'file'); |
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| 60 | end |
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| 61 | [success,message]=copyfile(xmlfile,backupfile);%make backup |
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| 62 | if success~=1 |
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| 63 | errormsg=['errror in xml file backup: ' message]; |
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| 64 | return |
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| 65 | end |
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| 66 | end |
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| 67 | t=xmltree(xmlfile); %read the file |
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| 68 | title=get(t,1,'name'); |
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| 69 | if ~strcmp(title,'ImaDoc') |
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| 70 | errormsg=[xmlfile ' not appropriate for calibration']; |
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| 71 | return |
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| 72 | end |
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| 73 | uid_calib=find(t,['ImaDoc/' StructName]); |
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| 74 | if isempty(uid_calib) %if Struct does not already exists, create it |
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| 75 | [t,uid_calib]=add(t,1,'element',StructName); |
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| 76 | else %if Struct already exists, delete its content |
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| 77 | uid_child=children(t,uid_calib); |
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| 78 | t=delete(t,uid_child); |
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| 79 | end |
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| 80 | else % create a new xml file |
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| 81 | t=xmltree; |
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| 82 | t=set(t,1,'name','ImaDoc'); |
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| 83 | [t,uid_calib]=add(t,1,'element',StructName); |
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| 84 | xmlfile=fullfile(RootPath,[SubDir '.xml']); |
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| 85 | end |
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| 86 | |
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| 87 | %% save the output file |
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| 88 | t=struct2xml(Struct,t,uid_calib); |
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| 89 | try |
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| 90 | save(t,xmlfile); |
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| 91 | catch ME |
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| 92 | errormsg=['error in saving ' xmlfile ': ' ME.message]; |
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| 93 | end |
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