1 | %'view_field': function associated with the GUI 'view_field.fig' for images and data field visualization
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2 | %------------------------------------------------------------------------
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3 | % function huvmat=view_field(input)
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4 | %
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5 | %OUTPUT
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6 | % huvmat=current handles of the GUI view_field.fig
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7 | %%
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8 | %
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9 | %INPUT:
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10 | % input: input file name (if character chain), or input image matrix to
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11 | % visualize, or Matlab structure representing netcdf fields (with fields
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12 | % ListVarName....)
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13 | %
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14 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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15 | % Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, joel.sommeria@legi.grenoble-inp.fr.
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16 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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17 | % This open is part of the toolbox VIEW_FIELD.
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18 | %
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19 | % VIEW_FIELD is free software; you can redistribute it and/or modify
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20 | % it under the terms of the GNU General Public License as published by
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21 | % the Free Software Foundation; either version 2 of the License, or
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22 | % (at your option) any later version.
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23 | %
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24 | % VIEW_FIELD is distributed in the hope that it will be useful,
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25 | % but WITHOUT ANY WARRANTY; without even the implied warranty of
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26 | % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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27 | % GNU General Public License (open VIEW_FIELD/COPYING.txt) for more details.
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28 | %AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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29 |
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30 | %-------------------------------------------------------------------
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31 | % I - MAIN FUNCTION VIEW_FIELD (DO NOT MODIFY)
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32 | %-------------------------------------------------------------------
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33 | %-------------------------------------------------------------------
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34 | function varargout = view_field(varargin)
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35 |
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36 | % Begin initialization code - DO NOT EDIT
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37 | gui_Singleton = 1;
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38 | gui_State = struct('gui_Name', mfilename, ...
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39 | 'gui_Singleton', gui_Singleton, ...
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40 | 'gui_OpeningFcn', @view_field_OpeningFcn, ...
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41 | 'gui_OutputFcn', @view_field_OutputFcn, ...
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42 | 'gui_LayoutFcn', [], ...
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43 | 'gui_Callback', []);
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44 | if nargin && ischar(varargin{1})
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45 | gui_State.gui_Callback = str2func(varargin{1});
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46 | end
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47 |
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48 | if nargout
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49 | varargout{1:nargout} = gui_mainfcn(gui_State, varargin{:});
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50 | else
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51 | gui_mainfcn(gui_State, varargin{:});
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52 | end
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53 | % End initialization code - DO NOT EDIT
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54 |
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55 | %-------------------------------------------------------------------
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56 | % --- Executes just before view_field is made visible.
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57 | function view_field_OpeningFcn(hObject, eventdata, handles, Field )
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58 | %-------------------------------------------------------------------
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59 |
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60 | % Choose default command menuline output for view_field
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61 | handles.output = handles.view_field;
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62 |
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63 | % Update handles structure
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64 | guidata(hObject, handles);
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65 |
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66 | %functions for the mouse and keyboard
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67 | set(hObject,'KeyPressFcn',{'keyboard_callback',handles})%set keyboard action function
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68 | set(hObject,'WindowButtonMotionFcn',{'mouse_motion',handles})%set mouse action functio
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69 | set(hObject,'WindowButtonDownFcn',{'mouse_down'})%set mouse click action function
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70 | set(hObject,'WindowButtonUpFcn',{'mouse_up',handles})
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71 | set(hObject,'DeleteFcn',{@closefcn})%
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72 | set(hObject,'ResizeFcn',{@ResizeFcn,handles})%
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73 | ViewFieldData.PlotAxes=[];%initiates the record of the current field (will be updated by plot_field)
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74 | set(handles.view_field,'Units','pixels')
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75 | ViewFieldData.GUISize=get(handles.view_field,'Position');
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76 | set(handles.view_field,'UserData',ViewFieldData);%store the initial fig size in UserData
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77 | AxeData.LimEditBox=1; %initialise AxeData, the parent figure sets plot parameters
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78 | set(handles.PlotAxes,'UserData',AxeData)
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79 | if exist('Field','var')
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80 | [PlotType,PlotParamOut]= plot_field(Field,handles.PlotAxes);%,PlotParam,KeepLim,PosColorbar)
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81 | set(handles.Coordinates,'Visible','on')
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82 | if isfield(PlotParamOut,'Vectors')
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83 | set(handles.Vectors,'Visible','on')
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84 | else
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85 | set(handles.Vectors,'Visible','off')
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86 | end
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87 | if isfield(PlotParamOut,'Scalar')
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88 | set(handles.Scalar,'Visible','on')
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89 | else
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90 | set(handles.Scalar,'Visible','off')
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91 | end
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92 |
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93 | errormsg=fill_GUI(PlotParamOut,hObject);
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94 | if ~isempty(errormsg)
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95 | msgbox_uvmat('ERROR',errormsg)
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96 | return
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97 | end
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98 | %write_plot_param(handles,PlotParamOut);% update the display of the plotting parameters
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99 | end
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100 |
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101 | %put the GUI on the lower right of the sceen
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102 | pos_view_field=get(hObject,'Position');
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103 | ScreenSize=get(0,'ScreenSize');
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104 | pos_view_field(1)=ScreenSize(1)+ScreenSize(3)-pos_view_field(3);
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105 | pos_view_field(2)=ScreenSize(2);
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106 | set(hObject,'Position',pos_view_field)
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107 |
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108 | %------------------------------------------------------------------------
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109 | %--- activated when resizing the GUI view_field
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110 | function ResizeFcn(gcbo,eventdata,handles)
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111 | %------------------------------------------------------------------------
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112 | set(handles.view_field,'Units','pixels')
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113 | size_fig=get(handles.view_field,'Position');
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114 | Data=get(handles.view_field,'UserData');
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115 | Data.GUISize=size_fig;
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116 | set(handles.view_field,'UserData',Data)
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117 |
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118 | %% reset position of text_display or TableDisplay
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119 | if strcmp(get(handles.TableDisplay,'Visible'),'off')
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120 | pos_1=get(handles.text_display,'Position');
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121 | pos_1(1)=size_fig(3)-pos_1(3);
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122 | pos_1(2)=size_fig(4)-pos_1(4);
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123 | set(handles.text_display,'Position',pos_1)
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124 | % reset position of TableDisplay
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125 | else
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126 | pos_1=get(handles.TableDisplay,'Position');
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127 | pos_1(1)=size_fig(3)-pos_1(3);
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128 | pos_1(2)=size_fig(4)-pos_1(4);
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129 | set(handles.TableDisplay,'Position',pos_1)
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130 | end
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131 |
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132 | %% reset position of Coordinates
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133 | pos_2=get(handles.Coordinates,'Position');
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134 | pos_2(1)=size_fig(3)-pos_1(3);
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135 | pos_2(2)=pos_1(2)-pos_2(4);
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136 | set(handles.Coordinates,'Position',pos_2)
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137 |
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138 | %% reset position of Scalar
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139 | pos_3=get(handles.Scalar,'Position');
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140 | pos_3(1)=size_fig(3)-pos_3(3);
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141 | if strcmp(get(handles.Scalar,'visible'),'on')
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142 | pos_3(2)=pos_2(2)-pos_3(4);
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143 | else
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144 | pos_3(2)=pos_2(2);
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145 | end
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146 | set(handles.Scalar,'Position',pos_3)
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147 |
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148 | %% reset position of Vectors
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149 | pos_4=get(handles.Vectors,'Position');
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150 | pos_4(1)=size_fig(3)-pos_4(3);
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151 | if strcmp(get(handles.Vectors,'visible'),'on')
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152 | pos_4(2)=pos_3(2)-pos_4(4);
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153 | else
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154 | pos_4(2)=pos_3(2);
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155 | end
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156 | set(handles.Vectors,'Position',pos_4)
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157 |
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158 | %% reset position and scale of axis
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159 | bord=[50 40 30 60]; %bordure left,inf, right,sup
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160 | pos(1)=bord(1);
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161 | pos(2)=bord(2);
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162 | pos(3)=max(1,pos_1(1)-pos(1)-bord(3));
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163 | pos(4)=max(1,size_fig(4)-bord(4));
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164 | set(handles.PlotAxes,'Position',pos)
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165 |
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166 | %------------------------------------------------------------------------
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167 | %------------------------------------------------------------------------
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168 | % --- Outputs from this function are returned to the command menuline.
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169 | function varargout = view_field_OutputFcn(hObject, eventdata, handles)
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170 | %------------------------------------------------------------------------
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171 | varargout{1} = handles.output;% the only output argument is the handle to the GUI figure
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172 | varargout{2} = strcmp(get(handles.PlotAxes,'Visible'),'on');% check active plot axis
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173 |
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174 | %------------------------------------------------------------------------
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175 | %--- activated when closing the GUI view_field
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176 | function closefcn(gcbo,eventdata)
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177 | %------------------------------------------------------------------------
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178 | huvmat=findobj(allchild(0),'Tag','uvmat');%find the current uvmat interface handle
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179 | if ~isempty(huvmat)
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180 | hhuvmat=guidata(huvmat);
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181 | set(hhuvmat.ViewField,'Value',0)
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182 | %set(hhuvmat.edit_object,'BackgroundColor',[0.7 0.7 0.7])%put unactivated buttons to gree
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183 | % deselect the object in ListObject when view_field is closed
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184 | if isempty(findobj(allchild(0),'Tag','set_object'))
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185 | ObjIndex=get(hhuvmat.ListObject,'Value');
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186 | ObjIndex=ObjIndex(1);%keep only the first object selected
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187 | set(hhuvmat.ListObject,'Value',ObjIndex)
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188 | % draw all object colors in blue (unselected) in uvmat
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189 | hother=[findobj(hhuvmat.PlotAxes,'Tag','proj_object');findobj(hhuvmat.PlotAxes,'Tag','DeformPoint')];%find all the proj object and deform point representations
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190 | for iobj=1:length(hother)
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191 | if isequal(get(hother(iobj),'Type'),'rectangle')||isequal(get(hother(iobj),'Type'),'patch')
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192 | set(hother(iobj),'EdgeColor','b')
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193 | if isequal(get(hother(iobj),'FaceColor'),'m')
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194 | set(hother(iobj),'FaceColor','b')
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195 | end
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196 | elseif isequal(get(hother(iobj),'Type'),'image')
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197 | Acolor=get(hother(iobj),'CData');
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198 | Acolor(:,:,1)=zeros(size(Acolor,1),size(Acolor,2));
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199 | set(hother(iobj),'CData',Acolor);
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200 | else
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201 | set(hother(iobj),'Color','b')
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202 | end
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203 | set(hother(iobj),'Selected','off')
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204 | end
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205 | end
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206 | end
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207 | hciv=findobj(allchild(0),'Tag','civ');%find the current civ GUI
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208 | if ~isempty(hciv)
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209 | hhciv=guidata(hciv);
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210 | set(hhciv.TestCiv1,'Value',0)% desactivate TestCiv1 if on
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211 | set(hhciv.TestCiv1,'BackgroundColor',[1 0 0])%
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212 | end
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213 | corrfig=findobj(allchild(0),'tag','corrfig');% look for a civ correlation window used with TesCiv1
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214 | if ~isempty(corrfig)
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215 | delete(corrfig)
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216 | end
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217 |
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218 | %-------------------------------------------------------------------
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219 | %-------------------------------------------------------------------
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220 | % II - FUNCTIONS FOR INTRODUCING THE INPUT FILES
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221 | % automatically sets the global properties when the rootfile name is introduced
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222 | % then activate the view-field action if selected
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223 | % it is activated either by clicking on the RootPath window or by the
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224 | % browser
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225 | %------------------------------------------------------------------
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226 | %------------------------------------------------------------------
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227 |
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228 | %-------------------------------------------------------------------
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229 | function update_mask(handles,num_i1,num_j1)
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230 | %-------------------------------------------------------------------
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231 |
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232 | MaskData=get(handles.mask_test,'UserData');
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233 | if isfield(MaskData,'maskhandle')&& ishandle(MaskData.maskhandle)
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234 | uistack(MaskData.maskhandle,'top');
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235 | end
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236 | num_i1_mask=mod(num_i1-1,MaskData.NbSlice)+1;
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237 | [RootPath,RootFile]=fullfile(MaskData.Base);
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238 | MaskName=fullfile_uvmat(RootPath,'',RootFile,'.png',MaskData.NomType,num_i1_mask,[],num_j1);
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239 | %[MaskName,mdetect]=name_generator(MaskData.Base,num_i1_mask,num_j1,'.png',MaskData.NomType);
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240 | huvmat=get(handles.mask_test,'parent');
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241 | UvData=get(huvmat,'UserData');
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242 |
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243 | %update mask image if the mask is new
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244 | if ~ (isfield(UvData,'MaskName') && isequal(UvData.MaskName,MaskName))
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245 | UvData.MaskName=MaskName; %update the recorded name on UvData
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246 | set(huvmat,'UserData',UvData);
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247 | if mdetect==0
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248 | if isfield(MaskData,'maskhandle')&& ishandle(MaskData.maskhandle)
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249 | delete(MaskData.maskhandle)
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250 | end
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251 | else
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252 | %read mask image
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253 | Mask.AName='image';
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254 | Mask.A=imread(MaskName);
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255 | npxy=size(Mask.A);
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256 | Mask.AX=[0.5 npxy(2)-0.5];
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257 | Mask.AY=[npxy(1)-0.5 0.5 ];
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258 | Mask.CoordUnit='pixel';
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259 | if isequal(get(handles.slices,'Value'),1)
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260 | NbSlice=str2num(get(handles.nb_slice,'String'));
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261 | num_i1=str2num(get(handles.i1,'String'));
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262 | Mask.ZIndex=mod(num_i1-1,NbSlice)+1;
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263 | end
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264 | %px to phys or other transform on field
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265 | menu_transform=get(handles.transform_fct,'String');
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266 | choice_value=get(handles.transform_fct,'Value');
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267 | transform_name=menu_transform{choice_value};%name of the transform fct given by the menu 'transform_fct'
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268 | transform_list=get(handles.transform_fct,'UserData');
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269 | transform=transform_list{choice_value};
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270 | if ~isequal(transform_name,'') && ~isequal(transform_name,'px')
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271 | if isfield(UvData,'XmlData') && isfield(UvData.XmlData,'GeometryCalib')%use geometry calib recorded from the ImaDoc xml file as first priority
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272 | Calib=UvData.XmlData.GeometryCalib;
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273 | Mask=transform(Mask,UvData.XmlData);
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274 | end
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275 | end
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276 | flagmask=Mask.A < 200;
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277 |
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278 | %make brown color image
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279 | imflag(:,:,1)=0.9*flagmask;
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280 | imflag(:,:,2)=0.7*flagmask;
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281 | imflag(:,:,3)=zeros(size(flagmask));
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282 |
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283 | %update mask image
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284 | hmask=[]; %default
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285 | if isfield(MaskData,'maskhandle')&& ishandle(MaskData.maskhandle)
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286 | hmask=MaskData.maskhandle;
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287 | end
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288 | if ~isempty(hmask)
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289 | set(hmask,'CData',imflag)
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290 | set(hmask,'AlphaData',flagmask*0.6)
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291 | set(hmask,'XData',Mask.AX);
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292 | set(hmask,'YData',Mask.AY);
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293 | % uistack(hmask,'top')
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294 | else
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295 | axes(handles.PlotAxes)
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296 | hold on
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297 | MaskData.maskhandle=image(Mask.AX,Mask.AY,imflag,'Tag','mask','HitTest','off','AlphaData',0.6*flagmask);
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298 | % set(MaskData.maskhandle,'AlphaData',0.6*flagmask)
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299 | set(handles.mask_test,'UserData',MaskData)
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300 | end
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301 | end
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302 | end
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303 |
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304 |
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305 | %-------------------------------------------------------------------
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306 | function MenuExportFigure_Callback(hObject, eventdata, handles)
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307 | %-------------------------------------------------------------------
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308 | huvmat=get(handles.MenuExport,'parent');
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309 | UvData=get(huvmat,'UserData');
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310 | hfig=figure;
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311 | newaxes=copyobj(handles.PlotAxes,hfig);
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312 | map=colormap(handles.PlotAxes);
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313 | colormap(map);%transmit the current colormap to the zoom fig
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314 | colorbar
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315 |
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316 | %-------------------------------------------------------------------
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317 | %-------------------------------------------------------------------
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318 | % III - MAIN REFRESH FUNCTIONS : 'FRAME PLOT'
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319 | %-------------------------------------------------------------------
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320 | %-------------------------------------------------------------------
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321 |
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322 | %Executes on button press in runplus: make one step forward and call
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323 | %run0. The step forward is along the fields series 1 or 2 depending on
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324 | %the scan_i and scan_j check box (exclusive each other)
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325 | %-------------------------------------------------------------------
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326 | function runplus_Callback(hObject, eventdata, handles)
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327 | increment=str2num(get(handles.increment_scan,'String')); %get the field increment d
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328 | runpm(hObject,eventdata,handles,increment)
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329 |
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330 | %-------------------------------------------------------------------
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331 | %Executes on button press in runmin: make one step backward and call
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332 | %run0. The step backward is along the fields series 1 or 2 depending on
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333 | %the scan_i and scan_j check box (exclusive each other)
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334 | %-------------------------------------------------------------------
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335 | function runmin_Callback(hObject, eventdata, handles)
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336 | increment=-str2num(get(handles.increment_scan,'String')); %get the field increment d
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337 | runpm(hObject,eventdata,handles,increment)
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338 |
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339 | % %-------------------------------------------------------------------
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340 | % %Executes on button press in runmin: make one step backward and call
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341 | % %run0. The step backward is along the fields series 1 or 2 depending on
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342 | % %the scan_i and scan_j check box (exclusive each other)
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343 | % %-------------------------------------------------------------------
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344 | % function RunMovie_Callback(hObject, eventdata, handles)
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345 | % %------------------------------------------------------------------
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346 | % set(handles.RunMovie,'BackgroundColor',[1 1 0])%paint the command button in yellow
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347 | % drawnow
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348 | % increment=str2num(get(handles.increment_scan,'String')); %get the field increment d
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349 | % set(handles.STOP,'Visible','on')
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350 | % set(handles.speed,'Visible','on')
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351 | % set(handles.speed_txt,'Visible','on')
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352 | % set(handles.RunMovie,'BusyAction','queue')
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353 | % testavi=0;
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354 | % UvData=get(handles.view_field,'UserData');
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355 | %
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356 | % while get(handles.speed,'Value')~=0 & isequal(get(handles.RunMovie,'BusyAction'),'queue') % enable STOP command
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357 | % runpm(hObject,eventdata,handles,increment)
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358 | % pause(1.02-get(handles.speed,'Value'))% wait for next image
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359 | % end
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360 | % if isfield(UvData,'aviobj') && ~isempty( UvData.aviobj),
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361 | % UvData.aviobj=close(UvData.aviobj);
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362 | % set(handles.view_field,'UserData',UvData);
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363 | % end
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364 | % set(handles.RunMovie,'BackgroundColor',[1 0 0])%paint the command buttonback to red
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365 |
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366 | %------------------------------------------------------------------------
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367 | % --- translate coordinate to matrix index
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368 | %------------------------------------------------------------------------
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369 | function [indx,indy]=pos2ind(x0,rangx0,nxy)
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370 | indx=1+round((nxy(2)-1)*(x0-rangx0(1))/(rangx0(2)-rangx0(1)));% index x of pixel
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371 | indy=1+round((nxy(1)-1)*(y12-rangy0(1))/(rangy0(2)-rangy0(1)));% index y of pixel
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372 |
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373 | %------------------------------------------------------------------------
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374 | % --- Executes on button press in 'CheckZoom'.
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375 | %------------------------------------------------------------------------
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376 | function CheckZoom_Callback(hObject, eventdata, handles)
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377 |
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378 | if get(handles.CheckZoom,'Value')
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379 | set(handles.CheckFixLimits,'Value',1)% propose by default fixed limits for the plotting axes
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380 | set(handles.CheckZoomFig,'Value',0)%desactivate zoom fig
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381 | end
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382 |
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383 | %------------------------------------------------------------------------
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384 | % --- Executes on button press in CheckZoomFig.
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385 | %------------------------------------------------------------------------
|
---|
386 | function CheckZoomFig_Callback(hObject, eventdata, handles)
|
---|
387 |
|
---|
388 | if get(handles.CheckZoomFig,'Value')
|
---|
389 | set(handles.CheckZoom,'value',0)
|
---|
390 | end
|
---|
391 |
|
---|
392 | %-------------------------------------------------------------------
|
---|
393 | % --- Executes on button press in 'FixLimits'.
|
---|
394 | %-------------------------------------------------------------------
|
---|
395 | function CheckFixLimits_Callback(hObject, eventdata, handles)
|
---|
396 | test=get(handles.CheckFixLimits,'Value');
|
---|
397 | % if test
|
---|
398 | % set(handles.CheckFixLimits,'BackgroundColor',[1 1 0])
|
---|
399 | % else
|
---|
400 | % set(handles.CheckFixLimits,'BackgroundColor',[0.7 0.7 0.7])
|
---|
401 | % end
|
---|
402 | update_plot(handles)
|
---|
403 |
|
---|
404 | %-------------------------------------------------------------------
|
---|
405 | % --- Executes on button press in CheckFixAspectRatio.
|
---|
406 | function CheckFixAspectRatio_Callback(hObject, eventdata, handles)
|
---|
407 | %-------------------------------------------------------------------
|
---|
408 | if get(handles.CheckFixAspectRatio,'Value')
|
---|
409 | update_plot(handles);
|
---|
410 | else
|
---|
411 | update_plot(handles);
|
---|
412 | end
|
---|
413 |
|
---|
414 | %-------------------------------------------------------------------
|
---|
415 | function num_AspectRatio_Callback(hObject, eventdata, handles)
|
---|
416 | %-------------------------------------------------------------------
|
---|
417 | set(handles.CheckFixAspectRatio,'Value',1)% select the fixed aspect ratio button
|
---|
418 | update_plot(handles);
|
---|
419 |
|
---|
420 | %-------------------------------------------------------------------
|
---|
421 |
|
---|
422 | % %-------------------------------------------------------------------
|
---|
423 | % %----Executes on button press in 'record': records the current flags of manual correction.
|
---|
424 | % %-------------------------------------------------------------------
|
---|
425 | % function record_Callback(hObject, eventdata, handles)
|
---|
426 | % % [filebase,num_i1,num_j1,num_i2,num_j2,Ext,NomType,SubDir]=read_input_file(handles);
|
---|
427 | % filename=read_file_boxes(handles);
|
---|
428 | % AxeData=get(gca,'UserData');
|
---|
429 | % [erread,message]=fileattrib(filename);
|
---|
430 | % if ~isempty(message) && ~isequal(message.UserWrite,1)
|
---|
431 | % msgbox_view_field('ERROR',['no writting access to ' filename])
|
---|
432 | % return
|
---|
433 | % end
|
---|
434 | % test_civ2=isequal(get(handles.civ2,'BackgroundColor'),[1 1 0]);
|
---|
435 | % test_civ1=isequal(get(handles.civ1,'BackgroundColor'),[1 1 0]);
|
---|
436 | % if ~test_civ2 && ~test_civ1
|
---|
437 | % msgbox_view_field('ERROR','manual correction only possible for CIV1 or CIV2 velocity fields')
|
---|
438 | % end
|
---|
439 | % if test_civ2
|
---|
440 | % nbname='nb_vectors2';
|
---|
441 | % flagname='vec2_FixFlag';
|
---|
442 | % attrname='fix2';
|
---|
443 | % end
|
---|
444 | % if test_civ1
|
---|
445 | % nbname='nb_vectors';
|
---|
446 | % flagname='vec_FixFlag';
|
---|
447 | % attrname='fix';
|
---|
448 | % end
|
---|
449 | % %write fix flags in the netcdf file
|
---|
450 | % hhh=which('netcdf.open');% look for built-in matlab netcdf library
|
---|
451 | % if ~isequal(hhh,'')% case of new builtin Matlab netcdf library
|
---|
452 | % nc=netcdf.open(filename,'NC_WRITE');
|
---|
453 | % netcdf.reDef(nc)
|
---|
454 | % netcdf.putAtt(nc,netcdf.getConstant('NC_GLOBAL'),attrname,1)
|
---|
455 | % dimid = netcdf.inqDimID(nc,nbname);
|
---|
456 | % try
|
---|
457 | % varid = netcdf.inqVarID(nc,flagname);% look for already existing fixflag variable
|
---|
458 | % catch
|
---|
459 | % varid=netcdf.defVar(nc,flagname,'double',dimid);%create fixflag variable if it does not exist
|
---|
460 | % end
|
---|
461 | % netcdf.endDef(nc)
|
---|
462 | % netcdf.putVar(nc,varid,AxeData.FF);
|
---|
463 | % netcdf.close(nc)
|
---|
464 | % else %old netcdf library
|
---|
465 | % netcdf_toolbox(filename,AxeData,attrname,nbname,flagname)
|
---|
466 | % end
|
---|
467 | %
|
---|
468 | % function netcdf_toolbox(filename,AxeData,attrname,nbname,flagname)
|
---|
469 | % nc=netcdf(filename,'write'); %open netcdf file
|
---|
470 | % result=redef(nc);
|
---|
471 | % eval(['nc.' attrname '=1;']);
|
---|
472 | % theDim=nc(nbname) ;% get the number of velocity vectors
|
---|
473 | % nb_vectors=size(theDim);
|
---|
474 | % var_FixFlag=ncvar(flagname,nc);% var_FixFlag will be written as the netcdf variable vec_FixFlag
|
---|
475 | % var_FixFlag(1:nb_vectors)=AxeData.FF;%
|
---|
476 | % fin=close(nc);
|
---|
477 |
|
---|
478 |
|
---|
479 | %-------------------------------------------------------------------
|
---|
480 | %-------------------------------------------------------------------
|
---|
481 | % - FUNCTIONS FOR SETTING PLOTTING PARAMETERS
|
---|
482 |
|
---|
483 | %------------------------------------------------------------------
|
---|
484 |
|
---|
485 |
|
---|
486 | %------------------------------------------------------------------
|
---|
487 | % --- Executes on selection change in col_vec: choice of the color code.
|
---|
488 | %
|
---|
489 | function col_vec_Callback(hObject, eventdata, handles)
|
---|
490 | %------------------------------------------------------------------
|
---|
491 | % edit the choice for color code
|
---|
492 | list_code=get(handles.col_vec,'String');% list menu fields
|
---|
493 | index_code=get(handles.col_vec,'Value');% selected string index
|
---|
494 | col_code= list_code{index_code(1)}; % selected field
|
---|
495 | if isequal(col_code,'black') | isequal(col_code,'white')
|
---|
496 | set(handles.slider1,'Visible','off')
|
---|
497 | set(handles.slider2,'Visible','off')
|
---|
498 | set(handles.colcode1,'Visible','off')
|
---|
499 | set(handles.colcode2,'Visible','off')
|
---|
500 | set(handles.AutoVecColor,'Visible','off')
|
---|
501 | set_vec_col_bar(handles)
|
---|
502 | else
|
---|
503 | set(handles.slider1,'Visible','on')
|
---|
504 | set(handles.slider2,'Visible','on')
|
---|
505 | set(handles.colcode1,'Visible','on')
|
---|
506 | set(handles.colcode2,'Visible','on')
|
---|
507 | set(handles.AutoVecColor,'Visible','on')
|
---|
508 | if isequal(col_code,'ima_cor')
|
---|
509 | set(handles.AutoVecColor,'Value',0)%fixed scale by default
|
---|
510 | set(handles.vec_col_bar,'Value',0)% 3 colors r,g,b by default
|
---|
511 | set(handles.slider1,'Min',0);
|
---|
512 | set(handles.slider1,'Max',1);
|
---|
513 | set(handles.slider2,'Min',0);
|
---|
514 | set(handles.slider2,'Max',1);
|
---|
515 | % set(handles.min_C_title_vec,'String','0')
|
---|
516 | set(handles.max_vec,'String','1')
|
---|
517 | set(handles.colcode1,'String','0.333')
|
---|
518 | colcode1_Callback(hObject, eventdata, handles)
|
---|
519 | set(handles.colcode2,'String','0.666')
|
---|
520 | colcode2_Callback(hObject, eventdata, handles)
|
---|
521 | else
|
---|
522 | set(handles.AutoVecColor,'Value',1)%auto scale between min,max by default
|
---|
523 | set(handles.vec_col_bar,'Value',1)% colormap 'jet' by default
|
---|
524 | minval=get(handles.slider1,'Min');
|
---|
525 | maxval=get(handles.slider1,'Max');
|
---|
526 | set(handles.slider1,'Value',minval)
|
---|
527 | set(handles.slider2,'Value',maxval)
|
---|
528 | set_vec_col_bar(handles)
|
---|
529 | end
|
---|
530 | % slider_update(handles)
|
---|
531 | end
|
---|
532 | %replot the current graph
|
---|
533 | run0_Callback(hObject, eventdata, handles)
|
---|
534 |
|
---|
535 |
|
---|
536 | %----------------------------------------------------------------
|
---|
537 | % -- Executes on slider movement to set the color code
|
---|
538 | %
|
---|
539 | function slider1_Callback(hObject, eventdata, handles)
|
---|
540 | %------------------------------------------------------------------
|
---|
541 | slider1=get(handles.slider1,'Value');
|
---|
542 | min_val=str2num(get(handles.min_vec,'String'));
|
---|
543 | max_val=str2num(get(handles.max_vec,'String'));
|
---|
544 | col=min_val+(max_val-min_val)*slider1;
|
---|
545 | set(handles.colcode1,'String',num2str(col))
|
---|
546 | if(get(handles.slider2,'Value') < col)%move also the second slider at the same value if needed
|
---|
547 | set(handles.slider2,'Value',col)
|
---|
548 | set(handles.colcode2,'String',num2str(col))
|
---|
549 | end
|
---|
550 | colcode1_Callback(hObject, eventdata, handles)
|
---|
551 |
|
---|
552 | %----------------------------------------------------------------
|
---|
553 | % Executes on slider movement to set the color code
|
---|
554 | %----------------------------------------------------------------
|
---|
555 | function slider2_Callback(hObject, eventdata, handles)
|
---|
556 | slider2=get(handles.slider2,'Value');
|
---|
557 | min_val=str2num(get(handles.min_vec,'String'));
|
---|
558 | max_val=str2num(get(handles.max_vec,'String'));
|
---|
559 | col=min_val+(max_val-min_val)*slider2;
|
---|
560 | set(handles.colcode2,'String',num2str(col))
|
---|
561 | if(get(handles.slider1,'Value') > col)%move also the first slider at the same value if needed
|
---|
562 | set(handles.slider1,'Value',col)
|
---|
563 | set(handles.colcode1,'String',num2str(col))
|
---|
564 | end
|
---|
565 | colcode2_Callback(hObject, eventdata, handles)
|
---|
566 |
|
---|
567 | %----------------------------------------------------------------
|
---|
568 | %execute on return carriage on the edit box corresponding to slider 1
|
---|
569 | %----------------------------------------------------------------
|
---|
570 | function colcode1_Callback(hObject, eventdata, handles)
|
---|
571 | % col=str2num(get(handles.colcode1,'String'));
|
---|
572 | % set(handles.slider1,'Value',col)
|
---|
573 | set_vec_col_bar(handles)
|
---|
574 | update_plot(handles)
|
---|
575 |
|
---|
576 | %----------------------------------------------------------------
|
---|
577 | %execute on return carriage on the edit box corresponding to slider 2
|
---|
578 | %----------------------------------------------------------------
|
---|
579 | function colcode2_Callback(hObject, eventdata, handles)
|
---|
580 | % col=str2num(get(handles.colcode2,'String'));
|
---|
581 | % set(handles.slider2,'Value',col)
|
---|
582 | % slider2_Callback(hObject, eventdata, handles)
|
---|
583 | set_vec_col_bar(handles)
|
---|
584 | update_plot(handles)
|
---|
585 |
|
---|
586 | %-------------------------------------------------------
|
---|
587 | % --- Executes on button press in AutoVecColor.
|
---|
588 | %-------------------------------------------------------
|
---|
589 | function vec_col_bar_Callback(hObject, eventdata, handles)
|
---|
590 | set_vec_col_bar(handles)
|
---|
591 |
|
---|
592 | %------------------------------------------------
|
---|
593 | %CALLBACKS FOR PLOTTING PARAMETERS
|
---|
594 | %-------------------------------------------------
|
---|
595 |
|
---|
596 | %------------------------------------------------------------------------
|
---|
597 | function num_MinX_Callback(hObject, eventdata, handles)
|
---|
598 | %------------------------------------------------------------------------
|
---|
599 | set(handles.CheckFixLimits,'Value',1) %suppress auto mode
|
---|
600 | % set(handles.CheckFixLimits,'BackgroundColor',[1 1 0])
|
---|
601 | update_plot(handles);
|
---|
602 |
|
---|
603 | %------------------------------------------------------------------------
|
---|
604 | function num_MaxX_Callback(hObject, eventdata, handles)
|
---|
605 | %------------------------------------------------------------------------
|
---|
606 | set(handles.CheckFixLimits,'Value',1) %suppress auto mode
|
---|
607 | % set(handles.CheckFixLimits,'BackgroundColor',[1 1 0])
|
---|
608 | update_plot(handles);
|
---|
609 |
|
---|
610 | %------------------------------------------------------------------------
|
---|
611 | function num_MinY_Callback(hObject, eventdata, handles)
|
---|
612 | %------------------------------------------
|
---|
613 | set(handles.CheckFixLimits,'Value',1) %suppress auto mode
|
---|
614 | % set(handles.CheckFixLimits,'BackgroundColor',[1 1 0])
|
---|
615 | update_plot(handles);
|
---|
616 |
|
---|
617 | %------------------------------------------------------------------------
|
---|
618 | function num_MaxY_Callback(hObject, eventdata, handles)
|
---|
619 | %------------------------------------------------------------------------
|
---|
620 | set(handles.CheckFixLimits,'Value',1) %suppress auto mode
|
---|
621 | % set(handles.CheckFixLimits,'BackgroundColor',[1 1 0])
|
---|
622 | update_plot(handles);
|
---|
623 |
|
---|
624 | %-----------------------------------------------------------------
|
---|
625 | function num_MinA_Callback(hObject, eventdata, handles)
|
---|
626 | %------------------------------------------
|
---|
627 | set(handles.CheckFixScalar,'Value',1) %suppress auto mode
|
---|
628 | set(handles.CheckFixScalar,'BackgroundColor',[1 1 0])
|
---|
629 | update_plot(handles)
|
---|
630 |
|
---|
631 | %-----------------------------------------------------------------
|
---|
632 | function num_MaxA_Callback(hObject, eventdata, handles)
|
---|
633 | %--------------------------------------------
|
---|
634 | set(handles.CheckFixScalar,'Value',1) %suppress auto mode
|
---|
635 | % set(handles.CheckFixScalar,'BackgroundColor',[1 1 0])
|
---|
636 | update_plot(handles)
|
---|
637 |
|
---|
638 | %-----------------------------------------------
|
---|
639 | function CheckFixScalar_Callback(hObject, eventdata, handles)
|
---|
640 | %--------------------------------------------
|
---|
641 | test=get(handles.CheckFixScalar,'Value');
|
---|
642 | % if test
|
---|
643 | % set(handles.CheckFixScalar,'BackgroundColor',[1 1 0])
|
---|
644 | % else
|
---|
645 | % set(handles.CheckFixScalar,'BackgroundColor',[0.7 0.7 0.7])
|
---|
646 | % update_plot(handles);
|
---|
647 | % % set(handles.MinA,'String',num2str(ScalOut.MinA,3))
|
---|
648 | % % set(handles.MaxA,'String',num2str(ScalOut.MaxA,3))
|
---|
649 | % end
|
---|
650 |
|
---|
651 | %-------------------------------------------------------------------
|
---|
652 | function CheckBW_Callback(hObject, eventdata, handles)
|
---|
653 | %-------------------------------------------------------------------
|
---|
654 | update_plot(handles)
|
---|
655 |
|
---|
656 | %-------------------------------------------------------------------
|
---|
657 | function ListContour_Callback(hObject, eventdata, handles)
|
---|
658 | %-------------------------------------------------------------------
|
---|
659 | val=get(handles.Contours,'Value');
|
---|
660 | if val==2
|
---|
661 | set(handles.interval_txt,'Visible','on')
|
---|
662 | set(handles.IncrA,'Visible','on')
|
---|
663 | else
|
---|
664 | set(handles.interval_txt,'Visible','off')
|
---|
665 | set(handles.IncrA,'Visible','off')
|
---|
666 | end
|
---|
667 | update_plot(handles)
|
---|
668 |
|
---|
669 | %-------------------------------------------------------------------
|
---|
670 | function IncrA_Callback(hObject, eventdata, handles)
|
---|
671 | %-------------------------------------------------------------------
|
---|
672 | update_plot(handles)
|
---|
673 |
|
---|
674 | %-------------------------------------------------------------------
|
---|
675 | function HideWarning_Callback(hObject, eventdata, handles)
|
---|
676 | %-------------------------------------------------------------------
|
---|
677 | update_plot(handles)
|
---|
678 |
|
---|
679 | %-------------------------------------------------------------------
|
---|
680 | function HideFalse_Callback(hObject, eventdata, handles)
|
---|
681 | %-------------------------------------------------------------------
|
---|
682 | update_plot(handles)
|
---|
683 |
|
---|
684 | %-------------------------------------------------------------------
|
---|
685 | function num_VecScale_Callback(hObject, eventdata, handles)
|
---|
686 | %-------------------------------------------------------------------
|
---|
687 | set(handles.CheckFixVectors,'Value',1);
|
---|
688 | update_plot(handles)
|
---|
689 |
|
---|
690 | %-------------------------------------------------------------------
|
---|
691 | function FixVec_Callback(hObject, eventdata, handles)
|
---|
692 | %-------------------------------------------------------------------
|
---|
693 | test=get(handles.FixVec,'Value');
|
---|
694 | if test
|
---|
695 | set(handles.FixVec,'BackgroundColor',[1 1 0])
|
---|
696 | else
|
---|
697 | update_plot(handles);
|
---|
698 | %set(handles.VecScale,'String',num2str(ScalOut.VecScale,3))
|
---|
699 | % set(handles.FixVec,'BackgroundColor',[0.7 0.7 0.7])
|
---|
700 | end
|
---|
701 |
|
---|
702 | %-------------------------------------------------------
|
---|
703 | % --- Executes on selection change in decimate4 (nb_vec/4).
|
---|
704 | %-------------------------------------------------------
|
---|
705 | function CheckDecimate4_Callback(hObject, eventdata, handles)
|
---|
706 | update_plot(handles)
|
---|
707 |
|
---|
708 |
|
---|
709 | %-------------------------------------------------------
|
---|
710 | % --- Executes on selection change in color_code menu
|
---|
711 | %-------------------------------------------------------
|
---|
712 | function color_code_Callback(hObject, eventdata, handles)
|
---|
713 | set_vec_col_bar(handles)
|
---|
714 | update_plot(handles);
|
---|
715 |
|
---|
716 | %-------------------------------------------------------
|
---|
717 | % --- Executes on button press in AutoVecColor.
|
---|
718 | %-------------------------------------------------------
|
---|
719 | function AutoVecColor_Callback(hObject, eventdata, handles)
|
---|
720 | test=get(handles.AutoVecColor,'Value');
|
---|
721 | if test
|
---|
722 | set(handles.AutoVecColor,'BackgroundColor',[1 1 0])
|
---|
723 | else
|
---|
724 | update_plot(handles);
|
---|
725 | %set(handles.VecScale,'String',num2str(ScalOut.VecScale,3))
|
---|
726 | set(handles.AutoVecColor,'BackgroundColor',[0.7 0.7 0.7])
|
---|
727 | end
|
---|
728 | %set_vec_col_bar(handles)
|
---|
729 |
|
---|
730 | %-------------------------------------------------------
|
---|
731 | % --- Executes on selection change in max_vec.
|
---|
732 | %-------------------------------------------------------
|
---|
733 | function min_vec_Callback(hObject, eventdata, handles)
|
---|
734 | max_vec_Callback(hObject, eventdata, handles)
|
---|
735 |
|
---|
736 | % --- Executes on selection change in max_vec.
|
---|
737 | function max_vec_Callback(hObject, eventdata, handles)
|
---|
738 | set(handles.AutoVecColor,'Value',1)
|
---|
739 | AutoVecColor_Callback(hObject, eventdata, handles)
|
---|
740 | min_val=str2num(get(handles.min_vec,'String'));
|
---|
741 | max_val=str2num(get(handles.max_vec,'String'));
|
---|
742 | slider1=get(handles.slider1,'Value');
|
---|
743 | slider2=get(handles.slider2,'Value');
|
---|
744 | colcode1=min_val+(max_val-min_val)*slider1;
|
---|
745 | colcode2=min_val+(max_val-min_val)*slider2;
|
---|
746 | set(handles.colcode1,'String',num2str(colcode1))
|
---|
747 | set(handles.colcode2,'String',num2str(colcode2))
|
---|
748 | update_plot(handles);
|
---|
749 |
|
---|
750 | %-------------------------------------------------------------------
|
---|
751 | %update the display of color code for vectors
|
---|
752 | function set_vec_col_bar(handles)
|
---|
753 | %-------------------------------------------------------------------
|
---|
754 | %get the image of the color display button 'vec_col_bar' in pixels
|
---|
755 | set(handles.vec_col_bar,'Unit','pixel');
|
---|
756 | pos_vert=get(handles.vec_col_bar,'Position');
|
---|
757 | set(handles.vec_col_bar,'Unit','Normalized');
|
---|
758 | width=ceil(pos_vert(3));
|
---|
759 | height=ceil(pos_vert(4));
|
---|
760 |
|
---|
761 | %get slider indications
|
---|
762 | list=get(handles.color_code,'String');
|
---|
763 | ichoice=get(handles.color_code,'Value');
|
---|
764 | colcode.ColorCode=list{ichoice};
|
---|
765 | colcode.MinC=str2num(get(handles.min_vec,'String'));
|
---|
766 | colcode.MaxC=str2num(get(handles.max_vec,'String'));
|
---|
767 | test3color=strcmp(colcode.ColorCode,'rgb') || strcmp(colcode.ColorCode,'bgr');
|
---|
768 | if test3color
|
---|
769 | colcode.colcode1=str2num(get(handles.colcode1,'String'));
|
---|
770 | colcode.colcode2=str2num(get(handles.colcode2,'String'));
|
---|
771 | end
|
---|
772 | colcode.FixedCbounds=0;
|
---|
773 | colcode.FixedCbounds=1;
|
---|
774 | vec_C=colcode.MinC+(colcode.MaxC-colcode.MinC)*[0.5:width-0.5]/width;%sample of vec_C values from min to max
|
---|
775 | [colorlist,col_vec]=set_col_vec(colcode,vec_C);
|
---|
776 | oneheight=ones(1,height);
|
---|
777 | A1=colorlist(col_vec,1)*oneheight;
|
---|
778 | A2=colorlist(col_vec,2)*oneheight;
|
---|
779 | A3=colorlist(col_vec,3)*oneheight;
|
---|
780 | A(:,:,1)=A1';
|
---|
781 | A(:,:,2)=A2';
|
---|
782 | A(:,:,3)=A3';
|
---|
783 | set(handles.vec_col_bar,'Cdata',A)
|
---|
784 |
|
---|
785 | %-------------------------------------------------------------------
|
---|
786 | function update_plot(handles)
|
---|
787 | %-------------------------------------------------------------------
|
---|
788 | Data=get(handles.view_field,'UserData');
|
---|
789 | AxeData=Data.PlotAxes;% retrieve the current plotted data
|
---|
790 | PlotParam=read_GUI(handles.view_field);
|
---|
791 | [PP,PlotParamOut]= plot_field(AxeData,handles.PlotAxes,PlotParam);
|
---|
792 | errormsg=fill_GUI(PlotParamOut,handles.view_field);
|
---|
793 | if ~isempty(errormsg)
|
---|
794 | msgbox_uvmat('ERROR',errormsg)
|
---|
795 | return
|
---|
796 | end
|
---|
797 | %write_plot_param(handles,PlotParamOut); %update the auto plot parameters
|
---|
798 |
|
---|
799 | %------------------------------------------------------------------------
|
---|
800 | % --- Executes on button press in Menu/Export/field in workspace.
|
---|
801 | function MenuExportField_Callback(hObject, eventdata, handles)
|
---|
802 | %------------------------------------------------------------------------
|
---|
803 | global Data_view_field
|
---|
804 | % huvmat=findobj(allchild(0),'Name','uvmat');
|
---|
805 | Data_view_field=get(handles.view_field,'UserData');
|
---|
806 | Data_view_field=Data_view_field.PlotAxes;
|
---|
807 | % Data_view_field=UvData.ProjField_2;
|
---|
808 | evalin('base','global Data_view_field')%make CurData global in the workspace
|
---|
809 | display(['UserData of view_field :'])
|
---|
810 | evalin('base','Data_view_field') %display CurData in the workspace
|
---|
811 | commandwindow;
|
---|
812 |
|
---|
813 | %------------------------------------------------------------------------
|
---|
814 | % --- Executes on button press in Menu/Export/extract figure.
|
---|
815 | function MenuExport_plot_Callback(hObject, eventdata, handles)
|
---|
816 | %------------------------------------------------------------------------
|
---|
817 | huvmat=get(handles.MenuExport_plot,'parent');
|
---|
818 | UvData=get(huvmat,'UserData');
|
---|
819 | hfig=figure;
|
---|
820 | newaxes=copyobj(handles.PlotAxes,hfig);
|
---|
821 | map=colormap(handles.PlotAxes);
|
---|
822 | colormap(map);%transmit the current colormap to the zoom fig
|
---|
823 | colorbar
|
---|
824 |
|
---|
825 |
|
---|
826 | % --- Executes on selection change in ColorCode.
|
---|
827 | function ColorCode_Callback(hObject, eventdata, handles)
|
---|
828 |
|
---|
829 |
|
---|
830 | % --- Executes on selection change in ColorScalar.
|
---|
831 | function ColorScalar_Callback(hObject, eventdata, handles)
|
---|
832 |
|
---|
833 |
|
---|
834 | function num_ColCode2_Callback(hObject, eventdata, handles)
|
---|
835 |
|
---|
836 |
|
---|
837 |
|
---|
838 | %
|
---|
839 | %
|
---|
840 | % % --- Executes when view_field is resized.
|
---|
841 | % function view_field_ResizeFcn(hObject, eventdata, handles)
|
---|
842 | % % hObject handle to view_field (see GCBO)
|
---|
843 | % % eventdata reserved - to be defined in a future version of MATLAB
|
---|
844 | % % handles structure with handles and user data (see GUIDATA)
|
---|
845 |
|
---|
846 |
|
---|
847 |
|
---|
848 |
|
---|