 Timestamp:
 Jan 4, 2011, 3:43:23 PM (13 years ago)
 Location:
 trunk/src/series
 Files:

 5 edited
Legend:
 Unmodified
 Added
 Removed

trunk/src/series/aver_stat.m
r158 r169 1 %'aver_stat': calculate field average, used with series.fig 2 % 3 % function GUI_input=aver_stat(num_i1,num_i2,num_j1,num_j2,Series) 4 % 5 %OUTPUT 6 % GUI_input=list of options in the GUI series.fig needed for the function 7 % 8 %INPUT: 9 %num_i1: series of first indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 10 %num_i2: series of second indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 11 %num_j1: series of first indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ ) 12 %num_j2: series of second indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ) 13 %Series: Matlab structure containing information set by the series interface 14 % 1 15 function GUI_input=aver_stat(num_i1,num_i2,num_j1,num_j2,Series) 2 16 % 
trunk/src/series/check_files.m
r32 r169 1 %'check_files': check the existence and status of the files selected by series.fig 2 % 3 % function GUI_input=check_files(num_i1,num_i2,num_j1,num_j2,Series) 4 % 5 %OUTPUT 6 % GUI_input=list of options in the GUI series.fig needed for the function 7 % 8 %INPUT: 9 %num_i1: series of first indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 10 %num_i2: series of second indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 11 %num_j1: series of first indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ ) 12 %num_j2: series of second indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ) 13 %Series: Matlab structure containing information set by the series interface 14 % 1 15 function GUI_input=check_files(num_i1_cell,num_i2_cell,num_j1_cell,num_j2_cell,Series) %(filecell,filecell_1,num_i,num_j,vel_type,field,param); 2 16 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 
trunk/src/series/merge_proj.m
r158 r169 1 %'merge_proj': project and concatene fields, used with series.fig 2 % 3 % function GUI_input=merge_proj(num_i1,num_i2,num_j1,num_j2,Series) 4 % 5 %OUTPUT 6 % GUI_input=list of options in the GUI series.fig needed for the function 7 % 8 %INPUT: 9 %num_i1: series of first indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 10 %num_i2: series of second indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 11 %num_j1: series of first indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ ) 12 %num_j2: series of second indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ) 13 %Series: Matlab structure containing information set by the series interface 14 % 1 15 function GUI_input=merge_proj(num_i1,num_i2,num_j1,num_j2,Series) 2 16 
trunk/src/series/sub_background.m
r143 r169 1 % 2 %  substract background to the images: rank the images by luminosity at each point and substracts to the images 1 %'sub_background': substract background to an image series, used with series.fig 2 % 3 % function GUI_input=aver_stat(num_i1,num_i2,num_j1,num_j2,Series) 4 % 5 %OUTPUT 6 % GUI_input=list of options in the GUI series.fig needed for the function 7 % 8 %INPUT: 9 %num_i1: series of first indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 10 %num_i2: series of second indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 11 %num_j1: series of first indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ ) 12 %num_j2: series of second indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ) 13 %Series: Matlab structure containing information set by the series interface 14 % .RootPath: path to the image series 15 % .RootFile: root file name 16 % .FileExt: image file extension 17 % .NomType: nomenclature type for file indexing 18 % .NbSlice: %number of slices defined on the interface 3 19 % 4 20 % Method: … … 14 30 % The processing can be done in slices (number nbslice), with bursts of 15 31 % nbfield2 successive images for a given slice (mode 'multilevel') 16 % In the mode 'volume', nbfield2=1 (1 image at each level), and 17 % nbslice= 18 %INPUT: 19 % num_i1: matrix of image indices i 20 % num_j1: matrix of image indices j, must be the same size as num_i1 21 % num_i2 and num_j2: not used for a function acting on images 22 % Series: matlab structure containing parameters, as defined by the interface UVMAT/series 23 % Series.RootPath: path to the image series 24 % Series.RootFile: root file name 25 % Series.FileExt: image file extension 26 % Series.NomType: nomenclature type for file indexing 27 % Series.NbSlice: %number of slices defined on the interface 28 32 % In the mode 'volume', nbfield2=1 (1 image at each level) 33 % 29 34 function GUI_input=sub_background (num_i1,num_i2,num_j1,num_j2,Series) 30 35 
trunk/src/series/time_series.m
r158 r169 1 function GUI_input=time_series(num_i1,num_i2,num_j1,num_j2,Series) 2 % 3 %  make a time series analysis 4 % 5 %INPUT: 1 %'time_series': extract a time series, used with series.fig 2 % 3 % function GUI_input=time_series(num_i1,num_i2,num_j1,num_j2,Series) 4 % 5 %OUTPUT 6 % GUI_input=list of options in the GUI series.fig needed for the function 7 % 8 %INPUT: 6 9 %num_i1: series of first indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 7 10 %num_i2: series of second indices i (given from the series interface as first_i:incr_i:last_i, mode and list_pair_civ) 8 11 %num_j1: series of first indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ ) 9 12 %num_j2: series of second indices j (given from the series interface as first_j:incr_j:last_j, mode and list_pair_civ) 10 %OTHER INPUTS given by the structure Series 13 %Series: Matlab structure containing information set by the series interface 14 % 15 function GUI_input=time_series(num_i1,num_i2,num_j1,num_j2,Series) 11 16 12 17 %requests for the visibility of input windows in the GUI series (activated directly by the selection in the menu ACTION)
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