Changeset 219

Timestamp:

Mar 9, 2011, 10:52:02 PM (13 years ago)

Author:

sommeria

Message:

civ: put job_list.bat in executable mode (it was removed during tests with mac)
needed to do civ in run mode

File:

• trunk/src/civ.m (modified) (5 diffs)

trunk/src/civ.m

@@ -2253 +2253 @@
     fprintf(fid,super_cmd');
     fclose(fid);
-%     if(isunix)
-        %system(['chmod +x ' filename_superbat])
+     if(isunix)
+        system(['chmod +x ' filename_superbat])
+     end
      system([filename_superbat ' &'])% execute main commmand
 %     else
@@ -4082 +4083 @@
 %     ncName=fullfile(Rootbat,[ Filebat '.nc']);
     cmd_CIV1=[sparam.Civ1Bin ' -f ' filename '.cmx >' filename '.log' ]; % redirect standard output to the log file, the result file is named [filename '.nc'] by CIVx
-    cmd_CIV1=[cmd_CIV1 '\n' 'mv ' filename '.log' ' ' filename '.civ1.log' '\n' 'chmod g+w ' filename '.nc'];%rename .log as .civ1.log and set the netcdf result file for group user writting
+    cmd_CIV1=[cmd_CIV1 '\n' 'mv ' filename '.log' ' ' filename '.civ1.log' '\n' 'chmod g+w ' filename '.civ1.log' '\n' 'chmod g+w ' filename '.nc'];%rename .log as .civ1.log and set the netcdf result file for group user writting
     cmd_CIV1=[cmd_CIV1 '\n' 'mv ' filename '.cmx' ' ' filename '.civ1.cmx' '\n'];%rename .cmx as .civ1.cmx
 else %Windows system
@@ -4640 +4641 @@
             option_str='not created';
         else
-            datfile=dir(civ_files{ifile})
+            datfile=dir(civ_files{ifile});
             if isfield(datfile,'datenum')
                 datnum(ifile)=datfile.datenum;%only available in recent matlab versions
@@ -4675 +4676 @@
         Tabchar{ifile,1}=[fullfile([subdir extdir],filename) ext  '...' option_str];
     end
-    datnum=datnum(find(datnum));%keep the non zero values corresponding to existing files
+    datnum=datnum(datnum~=0);%keep the non zero values corresponding to existing files
     if isempty(datnum) 
         if testrecent
@@ -4683 +4684 @@
         end
     else
-        datnum=datnum(find(datnum));%keep the non zero values corresponding to existing files
+        datnum=datnum(datnum~=0);%keep the non zero values corresponding to existing files
         [first,ind]=min(datnum);
         [last,indlast]=max(datnum);