Index: unk/src/datatree_browser.m =================================================================== --- /trunk/src/datatree_browser.m (revision 567) +++ (revision ) @@ -1,807 +1,0 @@ -%'datatree_browser': function for scanning directories in a campaign -%------------------------------------------------------------------------ -% function varargout = series(varargin) -% associated with the GUI datatree_browser.fig - -%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA -% Copyright Joel Sommeria, 2008, LEGI / CNRS-UJF-INPG, sommeria@coriolis-legi.org. -%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA -% This file is part of the toolbox UVMAT. -% -% UVMAT is free software; you can redistribute it and/or modify -% it under the terms of the GNU General Public License as published by -% the Free Software Foundation; either version 2 of the License, or -% (at your option) any later version. -% -% UVMAT is distributed in the hope that it will be useful, -% but WITHOUT ANY WARRANTY; without even the implied warranty of -% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -% GNU General Public License (file UVMAT/COPYING.txt) for more details. -%AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA - -function varargout = datatree_browser(varargin) - -% Last Modified by GUIDE v2.5 29-Jul-2012 08:49:20 - -% Begin initialization code - DO NOT EDIT -gui_Singleton = 1; -gui_State = struct('gui_Name', mfilename, ... - 'gui_Singleton', gui_Singleton, ... - 'gui_OpeningFcn', @datatree_browser_OpeningFcn, ... - 'gui_OutputFcn', @datatree_browser_OutputFcn, ... - 'gui_LayoutFcn', [] , ... - 'gui_Callback', []); -if nargin && ischar(varargin{1}) && ~isempty(regexp(varargin{1},'_Callback','once')) - gui_State.gui_Callback = str2func(varargin{1}); -end - -if nargout - [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:}); -else - gui_mainfcn(gui_State, varargin{:}); -end -% End initialization code - DO NOT EDIT - -%------------------------------------------------------------------------ -% --- Executes just before datatree_browser is made visible. -function datatree_browser_OpeningFcn(hObject, eventdata, handles, InputName) -%------------------------------------------------------------------------ -% Choose default command line output for datatree_browser -handles.output = 'Cancel'; - -% Update handles structure -guidata(hObject, handles); -testCancel=1; -testinputstring=0; -icontype='quest';%default question icon (text input asked) - -% Determine the position of the dialog - centered on the screen -FigPos=get(0,'DefaultFigurePosition'); -OldUnits = get(hObject, 'Units'); -set(hObject, 'Units', 'pixels'); -OldPos = get(hObject,'Position'); -FigWidth = OldPos(3); -FigHeight = OldPos(4); -ScreenUnits=get(0,'Units'); -set(0,'Units','pixels'); -ScreenSize=get(0,'ScreenSize'); -set(0,'Units',ScreenUnits); - -FigPos(1)=1/2*(ScreenSize(3)-FigWidth); -FigPos(2)=2/3*(ScreenSize(4)-FigHeight); -FigPos(3:4)=[FigWidth FigHeight]; -set(hObject, 'Position', FigPos); -set(hObject, 'Units', OldUnits); - -if exist('InputName','var') - if isdir(InputName)% opening by uvmat/MenuSetProject - set(handles.SourceDir,'String',InputName)% the input directory is considered as a project - set(handles.LinkDir,'Visible','off') - set(handles.UpdateLink,'String','create_link') - set(handles.MarkupDir,'Visible','on') - - else% opening by uvmat/Open - InputDir=regexprep(InputName,'.xml$',''); - if exist(InputDir,'dir') - s=xml2struct(InputName); - if isfield(s,'SourceDir') - set(handles.SourceDir,'String',s.SourceDir) - set(handles.LinkDir,'String',InputDir) - set(handles.LinkDir,'Visible','on') - else - set(handles.SourceDir,'String',InputDir) - set(handles.LinkDir,'Visible','off') - set(handles.MarkupDir,'String','CreateLink') - end - end - end - FillExperiments(handles) - set(handles.OK,'Visible','on') - drawnow -end - - -%------------------------------------------------------------------------ -% --- Outputs from this function are returned to the command line. -function varargout = datatree_browser_OutputFcn(hObject, eventdata, handles) -%------------------------------------------------------------------------ -% Get default command line output from handles structure -varargout{1} = handles.output; -%delete(handles.datatree_browser) - -%------------------------------------------------------------------------ -% --- Executes on button press in MarkupDir: create a xml file to mark SourceDir as project source -function MarkupDir_Callback(hObject, eventdata, handles) -%------------------------------------------------------------------------ -SourceDir=get(handles.SourceDir,'String'); -t=xmltree; -t=set(t,1,'name','Project'); -try -save(t,[SourceDir '.xml']) -catch ME - msgbox_uvmat('ERROR',ME.message) -end - -%------------------------------------------------------------------------ -% --- Executes on button press in UpdateLink: create a link dir or update it if it exists -function UpdateLink_Callback(hObject, eventdata, handles) -%------------------------------------------------------------------------ -[SourcePath,ProjectName]=fileparts(get(handles.SourceDir,'String')); -LinkDir=get(handles.LinkDir,'String'); -if isempty(LinkDir)||strcmp(get(handles.LinkDir,'Visible'),'off') - LinkRoot=uigetdir(LinkDir,'pick up the path to the link directory'); %file browser - if isempty(LinkRoot),return,end - LinkDir=fullfile(LinkRoot,[ProjectName '.link']); - set(handles.LinkDir,'Visible','on') - set(handles.LinkDir,'String',LinkDir) -end - -if ~exist(LinkDir,'dir') - try - mkdir(LinkDir) - catch ME - msgbox_uvmat('ERROR',ME.message) - end -end -LinkDirXml=fullfile(fileparts(LinkDir),[ProjectName '.link.xml']); -if ~exist(LinkDirXml,'file') - LinkDoc.SourceDir=get(handles.SourceDir,'String'); - t=struct2xml(LinkDoc); - t=set(t,1,'name','Project'); - save(t,LinkDirXml) - set(handles.UpdateLink,'String','update_link') -end - -FillExperiments(handles) - -%------------------------------------------------------------------------ -% --- Fill the column 'Experiments' with the list of detected directries -function FillExperiments(handles) -%------------------------------------------------------------------------ -SourceDir=get(handles.SourceDir,'String'); -LinkDir=''; -if strcmp(get(handles.LinkDir,'Visible'),'on') - LinkDir=get(handles.LinkDir,'String'); -end - -hdir=dir(SourceDir); %list files and dirs -idir=0; -ExpName=cell(length(hdir),1); -for ilist=1:length(hdir) - if hdir(ilist).isdir - dirname=hdir(ilist).name; - if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0')% do not list directories beginning by '0' - idir=idir+1; - ExpName{idir}=hdir(ilist).name; - if ~isempty(LinkDir) - link=fullfile(LinkDir,ExpName{idir}); - if ~exist(link,'dir') - mkdir(link)% create the directory containing links - end - end - end - end -end -set(handles.ListExperiments,'String',[{'*'};ExpName(1:idir)]) -set(handles.ListExperiments,'Value',1) -ListExperiments_Callback([],[], handles) - - -%------------------------------------------------------------------------ -% --- Executes on selection change in ListExperiments. - function ListExperiments_Callback(hObject,eventdata,handles) -%------------------------------------------------------------------------ -SourcePath=get(handles.SourceDir,'String'); -MirrorPath=''; -if strcmp(get(handles.LinkDir,'Visible'),'on') - MirrorPath=get(handles.LinkDir,'String'); -end -ListExperiments=get(handles.ListExperiments,'String'); -if isequal(get(handles.ListExperiments,'Value'),1) - ListExperiments=ListExperiments(2:end); %choose all experiments if the first line '*' has been selected -else - ListExperiments=ListExperiments(get(handles.ListExperiments,'Value')); -end -ListDevices={}; - -%% loop on the list of selected experiments -for iexp=1:numel(ListExperiments) - - % update the directory of the sources and update the links in the case of a link dir - hdir=dir(fullfile(SourcePath,ListExperiments{iexp})); %list files and folders in the source - for ilist=1:length(hdir) - Device=hdir(ilist).name; - if ~isequal(Device(1),'.') - if ~isempty(MirrorPath)% we list the links to the data directories of files - link=fullfile(MirrorPath,ListExperiments{iexp},Device); - if ~exist(link)% create a link if it does not exist - source=fullfile(SourcePath,ListExperiments{iexp},Device); - system(['ln -s ' source ' ' link])%TODO translate for DOS - end - Device=['@' Device]; - end - if hdir(ilist).isdir - Device=[Device '/']; - end - check_list=strcmp(Device,ListDevices); - if isempty(find(check_list)) - ListDevices=[ListDevices;Device]; - end - end - end - - % check for dir and files in the link dir which do not exist in the source dir - if ~isempty(MirrorPath) - hdir=dir(fullfile(MirrorPath,ListExperiments{iexp})); %list files and folders in the link dir - for ilist=1:length(hdir) - Device=hdir(ilist).name; - if ~isequal(Device(1),'.') - if hdir(ilist).isdir - Device=[Device '/']; - end - check_list=strcmp(Device,ListDevices) | strcmp(['@' Device],ListDevices); - if isempty(find(check_list)) - ListDevices=[ListDevices;Device]; - end - end - end - end -end - -%% display the updated list, keeping track of the previously selected item -PreviousList=get(handles.ListDevices,'String'); -NewValue=[]; -if ~isempty(PreviousList)&&iscell(PreviousList) - PreviousDevice=PreviousList{get(handles.ListDevices,'Value')}; - NewValue=find(strcmp(PreviousDevice,ListDevices)); -end -if isempty(NewValue) - NewValue=1; -end -set(handles.ListDevices,'Value',NewValue) -set(handles.ListDevices,'String',ListDevices) - - -%------------------------------------------------------------------------ -% --- Executes on selection in column ListDevices -function ListDevices_Callback(hObject, eventdata, handles) -%------------------------------------------------------------------------ -list_val=get(handles.ListExperiments,'Value'); -if isequal(list_val,1) || numel(list_val)~=1 - msgbox_uvmat('ERROR','select a single experiment in the column ''Experiments''') - return -end -ListExperiments=get(handles.ListExperiments,'String'); -Experiment=ListExperiments{list_val}; -RootPath=''; -if strcmp(get(handles.LinkDir,'Visible'),'on') - RootPath=get(handles.LinkDir,'String'); -end -if isempty(RootPath) -RootPath=get(handles.SourceDir,'String'); -end -ListDevices=get(handles.ListDevices,'String'); -Device=ListDevices{get(handles.ListDevices,'Value')}; -Device=regexprep(Device,'^@',''); - -%% open the selected file -% case of a directory, open a file inside -if strcmp(Device(end),'/') - DataDir=fullfile(RootPath,Experiment,Device(1:end-1)); - DirList=dir(DataDir); - for ilist=1:numel(DirList) - if ~DirList(ilist).isdir - [tild,tild,FileExt]=fileparts(DirList(ilist).name); - FileExt=regexprep(FileExt,'^.',''); - if ~isempty(FileExt) && (~isempty(imformats(FileExt))||strcmp(lower(FileExt),'avi')||strcmp(lower(FileExt),'nc')) - uvmat(fullfile(DataDir,DirList(ilist).name)) - return - end - end - end - % open browser if no valid input file has been detected - [FileName, PathName] = uigetfile( ... - { '*.*', 'All Files (*.*)'}, ... - 'Pick a mask file *.png',DataDir); - if ~isempty(FileName) - uvmat(fullfile(PathName,FileName)); - return - end -else %case of a file - uvmat(fullfile(RootPath,Experiment,Device)) - return -end - - - -%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% - - - -% %------------------------------------------------------------------------ -% % --- Executes on selection change in ListRecords. -% function ListRecords_Callback(hObject, eventdata, handles) -% Value=get(handles.ListRecords,'Value'); -% if isequal(Value(1),1) -% set(handles.ListRecords,'Value',1); -% end - -% %------------------------------------------------------------------------ -% % --- Executes on button press in CampaignDoc. -% function CampaignDoc_Callback(hObject, eventdata, handles) -% %------------------------------------------------------------------------ -% answer=msgbox_uvmat('INPUT_Y-N','This function will update the global xml rpresentation of the data set and the Heading of each xml file') -% if ~isequal(answer{1},'OK') -% return -% end -% set(handles.ListExperiments,'Value',1) -% ListExperiments_Callback(handles)%update the overview of the experiment directories -% DataviewData=get(handles.datatree_browser,'UserData'); -% List=DataviewData.List; -% Currentpath=get(handles.SourceDir,'String'); -% [Currentpath,Campaign,DirExt]=fileparts(Currentpath); -% Campaign=[Campaign DirExt]; -% t=xmltree; -% t=set(t,1,'name','CampaignDoc'); -% t = attributes(t,'add',1,'source','directory'); -% SubCampaignTest=get(handles.SubCampaignTest,'Value'); -% root_uid=1; -% if SubCampaignTest -% %TO DO open an exoiting xml doc -% [t,root_uid]=add(t,1,'element','SubCampaign'); -% t =attributes(t,'add',root_uid,'DirName',Campaign); -% end -% for iexp=1:length(List.Experiment) -% set(handles.ListExperiments,'Value',iexp+1) -% drawnow -% test_mod=0; -% [t,uid_exp]=add(t,root_uid,'element','Experiment'); -% t = attributes(t,'add',uid_exp,'i',num2str(iexp)); -% ExpName=List.Experiment{iexp}.name; -% t = attributes(t,'add',uid_exp,'DirName',List.Experiment{iexp}.name); -% -% if isfield(List.Experiment{iexp},'Device') -% for idevice=1:length(List.Experiment{iexp}.Device) -% [t,uid_device]=add(t,uid_exp,'element','Device'); -% DeviceName=List.Experiment{iexp}.Device{idevice}.name; -% t = attributes(t,'add',uid_device,'DirName',List.Experiment{iexp}.Device{idevice}.name); -% if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; -% [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,[],FileName,SubCampaignTest); -% if test -% [List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} ' , Heading updated'] -% end -% if isequal(Title,'ImaDoc') -% [t,uid_xml]=add(t,uid_device,'element','ImaDoc'); -% t = attributes(t,'add',uid_xml,'source','file'); -% [t]=add(t,uid_xml,'chardata',List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}); -% end -% end -% elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') -% for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) -% RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; -% [t,uid_record]=add(t,uid_device,'element','Record'); -% t = attributes(t,'add',uid_record,'DirName',RecordName); -% if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; -% [Title,test]=check_heading(Currentpath,Campaign,ExpName,DeviceName,RecordName,FileName,SubCampaignTest); -% if test -% [FileName ' , Heading updated'] -% end -% [t,uid_xml]=add(t,uid_record,'element','ImaDoc'); -% t = attributes(t,'add',uid_xml,'source','file'); -% [t]=add(t,uid_xml,'chardata',FileName); -% end -% end -% end -% end -% end -% end -% end -% set(handles.ListExperiments,'Value',1) -% outputdir=get(handles.SourceDir,'String'); -% [path,dirname]=fileparts(outputdir); -% outputfile=fullfile(outputdir,[dirname '.xml']); -% %campaigndoc(t); -% save(t,outputfile) -% -% %------------------------------------------------------------------------ -% % --- Executes on button press in CampaignDoc. -% function edit_xml_Callback(hObject, eventdata, handles) -% %------------------------------------------------------------------------ -% CurrentPath=get(handles.SourceDir,'String'); -% %[CurrentPath,Name,Ext]=fileparts(CurrentDir); -% ListExperiments=get(handles.ListExperiments,'String'); -% Value=get(handles.ListExperiments,'Value'); -% if ~isequal(Value,1) -% ListExperiments=ListExperiments(Value); -% end -% ListDevices=get(handles.ListDevices,'String'); -% Value=get(handles.ListDevices,'Value'); -% if ~isequal(Value,1) -% ListDevices=ListDevices(Value); -% end -% ListRecords=get(handles.ListRecords,'String'); -% Value=get(handles.ListRecords,'Value'); -% if ~isequal(Value,1) -% ListRecords=ListRecords(Value); -% end -% [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); -% ListXml=get(handles.ListXml,'String'); -% Value=get(handles.ListXml,'Value'); -% set(handles.ListXml,'Value',Value(1)); -% if isequal(Value(1),1) -% msgbox_uvmat('ERROR','an xml file needs to be selected') -% return -% else -% XmlName=ListXml{Value(1)}; -% end -% for iexp=1:length(List.Experiment) -% ExpName=List.Experiment{iexp}.name; -% if isfield(List.Experiment{iexp},'Device') -% for idevice=1:length(List.Experiment{iexp}.Device) -% DeviceName=List.Experiment{iexp}.Device{idevice}.name; -% if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml} -% if isequal(FileName,XmlName) -% editxml(fullfile(CurrentPath,ExpName,DeviceName,FileName)); -% return -% end -% end -% elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') -% for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) -% RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; -% if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; -% if isequal(FileName,XmlName) -% editxml(fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName)); -% return -% end -% end -% end -% end -% end -% end -% end -% end - - -% -% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -% % CurrentPath/Campaign: root directory -% function [Title,test_mod]=check_heading(Currentpath,Campaign,Experiment,Device,Record,xmlname,testSubCampaign) -% -% %Shema for Heading: -% % Campaign -% % (SubCampaign) -% % Experiment -% % Device -% % (Record) -% % ImageName -% % DateExp -% % old: %Project: suppressed ( changed to Campaign) -% %Exp: suppressed (changed to experiment) -% %ImaNames: changed to ImageName -% if exist('Record','var') && ~isempty(Record) -% xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,Record,xmlname); -% testrecord=1; -% else -% xmlfullname=fullfile(Currentpath,Campaign,Experiment,Device,xmlname); -% testrecord=0; -% end -% if ~exist('testSubCampaign','var') -% testSubCampaign=0; -% end -% if testSubCampaign -% SubCampaign=Campaign; -% [Currentpath,Campaign,DirExt]=fileparts(Currentpath); -% Campaign=[Campaign DirExt]; -% end -% test_mod=0; %test for the modification of the xml file -% t_device=xmltree(xmlfullname); -% Title=get(t_device,1,'name'); -% uid_child=children(t_device,1); -% Heading_old=[]; -% uidheading=0; -% for ilist=1:length(uid_child) -% name=get(t_device,uid_child(ilist),'name'); -% if isequal(name,'Heading') -% uidheading=uid_child(ilist); -% end -% end -% if uidheading -% subt=branch(t_device,uidheading); -% Heading_old=convert(subt); -% else -% return % do not edit xml files without element 'Heading' -% end -% if ~(isfield(Heading_old,'Campaign')&& isequal(Heading_old.Campaign,Campaign)) -% test_mod=1; -% end -% Heading.Campaign=Campaign; -% if testSubCampaign -% if ~(isfield(Heading_old,'SubCampaign')&& isequal(Heading_old.SubCampaign,SubCampaign)) -% test_mod=1; -% end -% Heading.SubCampaign=SubCampaign; -% end -% if ~(isfield(Heading_old,'Experiment')&& isequal(Heading_old.Experiment,Experiment)) -% test_mod=1; -% end -% Heading.Experiment=Experiment; -% if ~(isfield(Heading_old,'Device')&& isequal(Heading_old.Device,Device)) -% test_mod=1; -% end -% Heading.Device=Device; -% if testrecord -% if ~(isfield(Heading_old,'Record')&& isequal(Heading_old.Record,Record)) -% test_mod=1; -% end -% Heading.Record=Record; -% end -% if isfield(Heading_old,'ImaNames') -% test_mod=1; -% if ~isempty(Heading_old.ImaNames) -% Heading.ImageName=Heading_old.ImaNames; -% end -% end -% if isfield(Heading_old,'ImageName')&& ~isempty(Heading_old.ImageName) -% Heading.ImageName=Heading_old.ImageName; -% end -% if isfield(Heading_old,'DateExp')&& ~isempty(Heading_old.DateExp) -% Heading.DateExp=Heading_old.DateExp; -% end -% if test_mod && uidheading -% uid_child=children(t_device,uidheading); -% t_device=delete(t_device,uid_child); -% t_device=struct2xml(Heading,t_device,uidheading); -% backupfile=xmlfullname; -% testexist=2; -% while testexist==2 -% backupfile=[backupfile '~']; -% testexist=exist(backupfile,'file'); -% end -% [success,message]=copyfile(xmlfullname,backupfile);%make backup -% if isequal(success,1) -% delete(xmlfullname) -% else -% return -% end -% save(t_device,xmlfullname) -% end - -%------------------------------------------------------------------------ -% --- Executes on button press in HELP. -function HELP_Callback(hObject, eventdata, handles) -path_to_uvmat=which ('uvmat')% check the path of uvmat -pathelp=fileparts(path_to_uvmat); -helpfile=fullfile(pathelp,'UVMAT_DOC','uvmat_doc.html'); -if isempty(dir(helpfile)), msgbox_uvmat('ERROR','Please put the help file uvmat_doc.html in the directory UVMAT/UVMAT_DOC') -else -web([helpfile '#dataview']) -end - -% -% -% % --- Executes on selection change in ListXml. -% function ListXml_Callback(hObject, eventdata, handles) -% Value=get(handles.ListXml,'Value'); -% if isequal(Value(1),1) -% set(handles.ListXml,'Value',1); -% end - - -% --- Executes on button press in clean_civ_cmx. -function clean_civ_cmx_Callback(hObject, eventdata, handles) -message='this function will delete all files with extensions .log, .bat, .cmx,.cmx2,.errors in the input directory(ies)'; -answer=msgbox_uvmat('INPUT_Y-N',message); -if ~isequal(answer,'Yes') - return -end -set(handles.ListExperiments,'Value',1) -ListDataDir(hObject, eventdata, handles)%update the overview of the experiment directories -DataviewData=get(handles.datatree_browser,'UserData') -List=DataviewData.List; -Currentpath=get(handles.SourceDir,'String'); -[Currentpath,Campaign,DirExt]=fileparts(Currentpath); -Campaign=[Campaign DirExt]; -SubCampaignTest=get(handles.SubCampaignTest,'Value'); -nbdelete_tot=0; -for iexp=1:length(List.Experiment) - set(handles.ListExperiments,'Value',iexp+1) - drawnow - test_mod=0; - ExpName=List.Experiment{iexp}.name; - nbdelete=0; - if isfield(List.Experiment{iexp},'Device') - for idevice=1:length(List.Experiment{iexp}.Device) - DeviceName=List.Experiment{iexp}.Device{idevice}.name; - if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') - currentdir=fullfile(Currentpath,Campaign,ExpName,DeviceName); - hdir=dir(currentdir); %list files and dirs - idir=0; - for ilist=1:length(hdir) - if hdir(ilist).isdir - dirname=hdir(ilist).name; - if ~isequal(dirname(1),'.')&&~isequal(dirname(1),'0') - CivDir=fullfile(currentdir,dirname) - hCivDir=dir(CivDir); - for ilist=1:length(hCivDir) - FileName=hCivDir(ilist).name; - [dd,ff,Ext]=fileparts(FileName); - if isequal(Ext,'.log')||isequal(Ext,'.bat')||isequal(Ext,'.cmx')||isequal(Ext,'.cmx2')|| isequal(Ext,'.errors') - delete(fullfile(CivDir,FileName)) - nbdelete=nbdelete+1; - end - end - end - end - end - elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') - for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) - RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; - if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') - 'look at subdirectories' - end - end - end - end - end - display([num2str(nbdelete) ' files deleted']) - nbdelete_tot=nbdelete_tot+nbdelete; -end -msgbox_uvmat('CONFIRMATION',['END: ' num2str(nbdelete_tot) ' files deleted by clean_civ_cmx']) -set(handles.ListExperiments,'Value',1) - -% -% % --- Executes on button press in OK. -% function OK_Callback(hObject, eventdata, handles) -% %------------------------------------------------------------------------ -% CurrentPath=get(handles.SourceDir,'String'); -% ListExperiments=get(handles.ListExperiments,'String'); -% IndicesExp=get(handles.ListExperiments,'Value'); -% if ~isequal(IndicesExp,1) -% ListExperiments=ListExperiments(IndicesExp); -% end -% ListDevices=get(handles.ListDevices,'String'); -% Value=get(handles.ListDevices,'Value'); -% if isequal(Value,1) -% msgbox_uvmat('ERROR','manually select in the GUI dataview the device being calibrated') -% return -% else -% ListDevices=ListDevices(Value); -% end -% ListRecords=get(handles.ListRecords,'String'); -% Value=get(handles.ListRecords,'Value'); -% if ~isequal(Value,1) -% ListRecords=ListRecords(Value); -% end -% [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); -% ListXml=get(handles.ListXml,'String'); -% Value=get(handles.ListXml,'Value'); -% if isequal(Value,1) -% msgbox_uvmat('ERROR','you need to select in the GUI dataview the xml files to edit') -% return -% else -% ListXml=ListXml(Value); -% end -% -% %update all the selected xml files -% DataviewData=get(handles.datatree_browser,'UserData'); -% % answer=msgbox_uvmat('INPUT_Y-N',[num2str(length(Value)) ' xml files for device ' ListDevices{1} ' will be refreshed with ' ... -% % DataviewData.GeometryCalib.CalibrationType ' calibration data']) -% % if ~isequal(answer,'Yes') -% % return -% % end -% %List.Experiment{1}.Device{1} -% %List.Experiment{2}.Device{1} -% for iexp=1:length(List.Experiment) -% ExpName=List.Experiment{iexp}.name; -% set(handles.ListExperiments,'Value',IndicesExp(iexp)); -% if isfield(List.Experiment{iexp},'Device') -% for idevice=1:length(List.Experiment{iexp}.Device) -% DeviceName=List.Experiment{iexp}.Device{idevice}.name; -% if isfield(List.Experiment{iexp}.Device{idevice},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.xmlfile{ixml}; -% for ilistxml=1:length(ListXml) -% if isequal(FileName,ListXml{ilistxml}) -% set(handles.ListXml,'Value',Value(ilistxml)) -% drawnow -% xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,FileName); -% update_imadoc(DataviewData.GeometryCalib,xmlfullname) -% display([xmlfullname ' updated']) -% break -% end -% end -% end -% elseif isfield(List.Experiment{iexp}.Device{idevice},'Record') -% for irecord=1:length(List.Experiment{iexp}.Device{idevice}.Record) -% RecordName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.name; -% if isfield(List.Experiment{iexp}.Device{idevice}.Record{irecord},'xmlfile') -% for ixml=1:length(List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile) -% FileName=List.Experiment{iexp}.Device{idevice}.Record{irecord}.xmlfile{ixml}; -% for ilistxml=1:length(ListXml) -% if isequal(FileName,ListXml{ilistxml}) -% set(handles.ListXml,'Value',Value(ilistxml)) -% drawnow -% xmlfullname=fullfile(CurrentPath,ExpName,DeviceName,RecordName,FileName); -% update_imadoc(DataviewData.GeometryCalib,xmlfullname) -% display([xmlfullname ' updated']) -% break -% end -% end -% end -% end -% end -% end -% end -% end -% end -% set(handles.ListXml,'Value',Value) -% -% -% -% -% -% -% -% CurrentPath=get(handles.SourceDir,'String');%= get(hObject,'String'); -% ListExperiments=get(handles.ListExperiments,'String'); -% Value=get(handles.ListExperiments,'Value'); -% if ~isequal(Value,1) -% ListExperiments=ListExperiments(Value); -% end -% ListDevices=get(handles.ListDevices,'String'); -% Value=get(handles.ListDevices,'Value'); -% if isequal(Value,1) -% msgbox_uvmat('ERROR','manually select in the GUI datatree_browser the device being calibrated') -% return -% else -% ListDevices=ListDevices(Value); -% end -% ListRecords=get(handles.ListRecords,'String'); -% Value=get(handles.ListRecords,'Value'); -% if ~isequal(Value,1) -% ListRecords=ListRecords(Value); -% end -% [ListDevices,ListRecords,ListXml,List]=ListDir(CurrentPath,ListExperiments,ListDevices,ListRecords); -% ListXml=get(handles.ListXml,'String'); -% Value=get(handles.ListXml,'Value'); -% if isequal(Value,1) -% msgbox_uvmat('ERROR','you need to select in the GUI datatree_browser the xml files to edit') -% return -% else -% ListXml=ListXml(Value); -% end -% handles.output.CurrentPath=CurrentPath; -% handles.output.ListExperiments=ListExperiments; -% handles.output.ListDevices=ListDevices; -% handles.output.ListRecords=ListRecords; -% handles.output.ListXml=ListXml; -% handles.output.List=List; -handles.output ='OK, Calibration replicated'; -guidata(hObject, handles);% Update handles structure -uiresume(handles.datatree_browser); -% -% % --- Executes on button press in Cancel. -% function Cancel_Callback(hObject, eventdata, handles) -% handles.output = get(hObject,'String'); -% guidata(hObject, handles); % Update handles structure -% % Use UIRESUME instead of delete because the OutputFcn needs -% uiresume(handles.datatree_browser); - -% --- Executes when user attempts to close datatree_browser. -function datatree_browser_CloseRequestFcn(hObject, eventdata, handles) -% if isequal(get(handles.datatree_browser, 'waitstatus'), 'waiting') -% % The GUI is still in UIWAIT, us UIRESUME -% uiresume(handles.datatree_browser); -% else -% % The GUI is no longer waiting, just close it -% delete(handles.datatree_browser); -% end -delete(hObject)