Changes between Version 18 and Version 19 of Installation


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Timestamp:
May 1, 2018, 2:06:37 PM (2 years ago)
Author:
sommeria
Comment:

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  • Installation

    v18 v19  
    1616To use the SVN server under Windows, you can install for instance slik subversion, [http://www.sliksvn.com/en/download], open a Dos terminal, and type the same command lines as for Linux. You can also use [http://tortoisesvn.tigris.org/ Tortoise SVN] with graphic interface. However the command line version is needed to allows uvmat to automatically check the consistency of the current package with the svn server.
    1717
    18 Note that the package  contains the toolboxes:
    19 
    20  * xmltree (http://www.artefact.tk/software/matlab/xml) , used for reading and editing xml files. A set of xml schemas, updated by SVN, is also provided as templates for editing xml files within uvmat.
    21  * geometric calibration (http://www.vision.caltech.edu/bouguetj/calib_doc)
    22 
    23 An upgrade of these toolboxes from their source web site may be needed depending on the system and Matlab version.
     18== Specific toobox and proprietary image formats ==
     19Note that the package  contains the toolbox xmltree (http://www.artefact.tk/software/matlab/xml), used for reading and editing xml files. This contains .ddl and mex files which may need to be updated from their source web site depending on the system and Matlab version. A set of xml schemas, updated by SVN, is also provided as templates for editing xml files within uvmat.
    2420
    2521The package is able to read movies using Matlab tools, and proprietary image formats which may require updates of reading functions.
     
    3127It is possible to add your own specific reading functions by first adding a specific format in the function ''get_file_info.m'' (recognised by means of file name extension for instance), and then modified the functions ''read_field.m'' and ''read_image.m''.
    3228
     29== User parameters ==
     30The five last input file names and specific functions used are stored for convenience in a file (''uvmat_perso.mat'')  automatically created in the user preference directory of Matlab  (indicated by the Matlab command '>>prefdir'. A corruption of this file ''uvmat_perso.mat''  may lead to problems for opening UVMAT. To revert to the initial configuration,  delete this file by typing '>>reinit' on the  Matlab prompt.
    3331== Installation on a cluster ==
    3432The package contains a GUI called ''''series'''' to launch computations in parallel on a computer cluster. This requires to define parameters in a file ''series.xml'' associated with a Matlab function (whose name is given in ''series.xml'') which produces the system command needed to launch computations. The file ''series.xml.default'' and the associated function ''cluster_command.m'', used at LEGI, are given as templates. Other examples are provided, for instance ''cluster_command_psmn.m'' used at ENSLyon.