Changes between Version 49 and Version 50 of UvmatHelp

Timestamp:

Jun 6, 2013, 11:40:40 PM (12 years ago)

Author:

sommeria

Comment:

--

UvmatHelp

@@ -606 +606 @@
 == 10 - Processing field series ==
 === 10.1 The GUI series.fig ===
-Operations on field series are controled by the GUI '''series.fig''', which allows the user to set the root name(s) and file indices over which a processing function operates. The root path, subdirectory, root file name and extension are introduced in the different columns of the table '''[!InputTable]'''. The nomenclature for file indexing is represented in the column '''[!NomType]''', the index extension for the first file in the series.
+Operations on field series are controled by the GUI '''series.fig''', which allows the user to set the root name(s) and file indices over which a processing function operates. The GUI can be opened from '''uvmat''' through its menu bar option '''[Run/series]'''. It then mirrors the settings of '''uvmat'''. It can be alternatively opened by typing the Matlab command ''>>series'', then selecting  the input file series by the menu bar command '''[Open]'''. 
+
+The root path, subdirectory, root file name and extension are introduced in the different columns of the table '''[!InputTable]'''. The nomenclature for file indexing is represented in the column '''[!NomType]''', the index extension for the first file in the series.
 
 Several input file series can be introduced simultaneously by the menu bar command''' [Open_append]''', filling the successive lines of '''!InputTable'''. By contrast, the table of input files is fully refreshed by the browser of the menu bar command '''[Open]'''. The cells in the table can be also edited manually. Then press the button '''[REFRESH]''' to validate the input. 
@@ -620 +622 @@
 When input files are indexed by pairs i1-i2 or j1-j2, as resulting from PIV, the pair indexing is chosen by the panel '''[Set Pairs]'''. The popup menu [mode] provides the choice between 'bursts', 'Di','Dj'. In mode 'bursts' a single j index pair is selected in the menu '''[ListPairs]'''. In mode 'Di' and 'Dj' it selects a given index interval in i or j respectively. Then the first_i and last_i refer to the ''reference indices''. With the option '*-*' in '''[!ListPairs]''', available pairs are automatically chosen. In case of multiple input lines, the selection from '''[Set pairs]''' refers to the line number displayed in [ListView]. It is  transfered to the corresponding line in the table '''[PairString]'''.
 
-The velocity type and field are automatioally chosen by default, but can be specified by the menus '''[VelType]''' and '''[FieldName]'''. In case of multiple input file series, these menus only refer to the first line. Then the menus '''[VelType_1]''' and '''[FieldName_1]''' refer to the second line, consistently with the input for the GUI '''uvmat'''.
+The velocity type and field are automatioally chosen by default, but can be specified by the menus '''[!VelType]''' and '''[!FieldName]'''. In case of multiple input file series, these menus only refer to the first line. Then the menus '''[!VelType_1]''' and '''[!FieldName_1]''' refer to the second line, consistently with the input for the GUI '''uvmat'''.
 
 A transform function can be introduced by the menu '''[!TransformName]'''. A projection object can be introduced by selecting the check box '''[!CheckObject]'''. If a projection object has been already created the  opened interface '''set_object.fig''' will be used. Otherwise a browser appears to open an object file (xml). Similarly the check box '''[!CheckMask]''' can be used to select a mask option. These different menus only appear if they are needed as input of the currently selected action function.
@@ -630 +632 @@
 
 === 10.3 aver_stat: ===
-This option provides any average over the processed files. If nb_slice is not equal to 1, the average is performed slice by slice, providing nb_slice results.   If a projection object is selected (check box '''[CheckObject]'''), the field is projected before averaging.
+This option provides any average over the processed files. If nb_slice is not equal to 1, the average is performed slice by slice, providing nb_slice results.   If a projection object is selected (check box '''[!CheckObject]'''), the field is projected before averaging.
 
 For unstructured coordinates varying for successive fields, the data is linearly interpolated on the coordinates of the first field in the series. It is then advised to project the fields on a regular grid, creating a projection object of type 'plane' with projection mode 'interp_lin' or 'interp_tps'.
@@ -663 +665 @@
 === 11.1 Overview ===
 
-The GUI '''civ.fig''' is used to run the programs [CIVx->3]  (Correlation Imaging Velocimetry). It is a free advanced Imaging Velocimetry implementation that relies on direct cross-correlation of pattern boxes between image pairs. The binary executable files suitable for the computer operating system need to be properly installed (see {uvmat_doc/README_INSTALL.txt }).
+PIV can be performed by selecting the Matlab function ''civ_series'' as '''[ActionName]''' in the GUI '''series'''. The same operations can be also performed with the older function ''civ.m'' running with the specific GUI '''civ.fig''', accessible from uvmat by the menu bar command '''[RUN/civ]'''. This older option is still used to run the fortran programs [CIVx].
 
 -''' {Opening the GUI:} ''' The GUI '''civ.fig''' for PIV calculation can be directly opened by the command '>>civ' on the Matlab prompt. Then open an image or a documentation file (.xml ) with the file browser. ''' '''The''' ''' GUI '''civ.fig''' can be also directly opened from '''uvmat.fig''', by the menu bar command '''[RUN/civ]'''.  A third way is just to open the Matlab image ({civ.fig} file) stored after each processing in the directory of the velocity fields. Then just edit it and run a new calculation.