Changeset 892 for trunk/src/phys_ima.m

Timestamp:

Apr 25, 2015, 6:17:19 PM (9 years ago)

Author:

sommeria

Message:

bug in refraction index fixed

File:

• trunk/src/phys_ima.m (modified) (2 diffs)

trunk/src/phys_ima.m

@@ +1 @@
+
 % phys_ima: transform several images in phys coordinates on a common pixel grid
 %------------------------------------------------------------------------
@@ -61 +62 @@
            SliceCoord=Calib.SliceCoord(ZIndex,:);
            zphys=SliceCoord(3); %to generalize for non-parallel planes
-           if isfield(Calib,'InterfaceCoord') && isfield(Calib,'RefractionIndex') 
-                H=Calib.InterfaceCoord(3);
-                if H>zphys
-                    zphys=H-(H-zphys)/Calib.RefractionIndex; %corrected z (virtual object)
-                end
-           end
+%            if isfield(Calib,'InterfaceCoord') && isfield(Calib,'RefractionIndex') 
+%                 H=Calib.InterfaceCoord(3);
+%                 if H>zphys
+%                     zphys=H-(H-zphys)/Calib.RefractionIndex; %corrected z (virtual object)
+%                 end
+%            end
         end
         xima=0.5:npx-0.5;%image coordinates of corners