Changeset 474 for trunk/src/series/sub_background.m

Timestamp:

Jun 25, 2012, 12:14:16 AM (12 years ago)

Author:

sommeria

Message:

functions adpated to mode background

File:

• trunk/src/series/sub_background.m (modified) (7 diffs)

trunk/src/series/sub_background.m

@@ -38 +38 @@
 %                      each line decomposed as {RootPath,SubDir,Rootfile,NomType,Extension}
 %    .OutputSubDir: name of the subdirectory for data outputs
-%    .OutputDir: directory for data outputs, including path
+%    .OutputDirExt: extension for the directory for data outputs
 %    .Action: .ActionName: name of the current activated function
 %             .ActionPath:   path of the current activated function
@@ -58 +58 @@
 %% set the input elements needed on the GUI series when the action is selected in the menu ActionName
 if ~exist('Param','var') % case with no input parameter 
-    ParamOut={'NbViewMax';1;...% max nbre of input file series (default='' , no limitation)
-        'AllowInputSort';'off';...% allow alphabetic sorting of the list of input files (options 'off'/'on', 'off' by default)
+    ParamOut={'AllowInputSort';'off';...% allow alphabetic sorting of the list of input files (options 'off'/'on', 'off' by default)
         'WholeIndexRange';'on';...% prescribes the file index ranges from min to max (options 'off'/'on', 'off' by default)
         'NbSlice';'on'; ...%nbre of slices ('off' by default)
@@ -89 +88 @@
 end
 ParamOut=Param; %default output
+OutputDir=[Param.OutputSubDir Param.OutputDirExt];
 
 %% root input file(s) and type
@@ -96 +96 @@
 NomType=Param.InputTable(:,4);
 FileExt=Param.InputTable(:,5);
-
-% get the set of input file names (cell array filecell), and the lists of
-% input file or frame indices i1_series,i2_series,j1_series,j2_series
 [filecell,i1_series,i2_series,j1_series,j2_series]=get_file_series(Param);
-% filecell{iview,fileindex}: cell array representing the list of file names
+%%%%%%%%%%%%
+% The cell array filecell is the list of input file names, while
+% filecell{iview,fileindex}:
 %        iview: line in the table corresponding to a given file series
 %        fileindex: file index within  the file series, 
 % i1_series(iview,ref_j,ref_i)... are the corresponding arrays of indices i1,i2,j1,j2, depending on the input line iview and the two reference indices ref_i,ref_j 
 % i1_series(iview,fileindex) expresses the same indices as a 1D array in file indices
-% set of frame indices used for movie or multimage input 
-% numbers of slices and file indices
-
+%%%%%%%%%%%%
 NbSlice=1;%default
 if isfield(Param.IndexRange,'NbSlice')&&~isempty(Param.IndexRange.NbSlice)
@@ -340 +337 @@
             j1=j1_series{1}(ifile);
         end
-        newname=fullfile_uvmat(RootPath{1},Param.OutputSubDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
+        newname=fullfile_uvmat(RootPath{1},OutputDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
         
         %write result file
@@ -390 +387 @@
                         j1=j1_series{1}(ifile);
                     end
-                    newname=fullfile_uvmat(RootPath{1},Param.OutputSubDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
+                    newname=fullfile_uvmat(RootPath{1},OutputDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
                     %write result file
                     if ParamOut.Specific.CheckLevelTransform
@@ -424 +421 @@
             j1=j1_series{1}(ifile);
         end
-        newname=fullfile_uvmat(RootPath{1},Param.OutputSubDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
+        newname=fullfile_uvmat(RootPath{1},OutputDir,RootFile{1},FileExtOut,NomTypeOut,i1_series{1}(ifile),[],j1);
         
         %write result file